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BaseInfo

ncRNA ID novel_zma_miR15179
Species Zea mays
Class miRNA
Genome position Chr8:100726992-100727046 [+]
Reference genome RefGen_v4
Source SRR2089707
Length 24
Mature sequence(if miRNA) 1 - AAUGUCUGUGGCACUCGGCAAAGA - 24
Stem-loop(if miRNA) --AA   C                 AG
    UGU UGUGGCACUCGGCAAAG  G
    ||| |||||||||||||||||  C
    ACG GUACUGUGAGCCGUUUC  A
CACG   C                 GC
Stem-loop sequence AAUGUCUGUGGCACUCGGCAAAGAGGCACGCUUUGCCGAGUGUCAUGCGCAGCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ238769.1
ncRNA:24   AGAAACGGCUCACGGUGUCUGUAA   1
  ||||||||||||||||=|||||||
targets:170   UCUUUGCCGAGUGCCAUAGACAUU   193

1.5 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget
JB167100.1
ncRNA:24   AGAAACGGCUCACGGUGUCUGUAA   1
  ||||||||||||||||=|||||||
targets:170   UCUUUGCCGAGUGCCAUAGACAUU   193

1.5 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
HI406639.1
ncRNA:24   AGAAACGGCUCACGGUGUCUGUAA   1
  ||||||||||||||||=|||||||
targets:170   UCUUUGCCGAGUGCCAUAGACAUU   193

1.5 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget