ncRNA ID | novel_zma_miR15176 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:34817933-34818043 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089707 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGUAUGCGAGUGGAGGUGGGGUUU - 24 |
Stem-loop(if miRNA) |
--GGUAU     U     U           G    AA    AA   --  UG    A        GCGAG GGAGG GGGGUUUUGCU CAUG  GUCG  GCU  GC  CGUU G        ||||| ||||| ||||||||||| ||||  ||||  |||  ||  ||||        UGCUU CUUCC CUCCAAAGCGG GUAC  UAGC  CGG  CG  GUAG G GGUUAGG     -     C           A    AG    AA   CU  GU    G |
Stem-loop sequence | GGUAUGCGAGUGGAGGUGGGGUUUUGCUGCAUGAAGUCGAAGCUGCUGCGUUAGGGGAUGUGGCUCGGCAACGAUGACAUGAGGCGAAACCUCCCCUUCUUCGUGGAUUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT070173.2 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFc0151L06 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT055256.2 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFc0058D06 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT066883.2 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFb0090O12 mRNA, complete cds | NA | coding protein | psRNATarget |