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BaseInfo

ncRNA ID novel_zma_miR15176
Species Zea mays
Class miRNA
Genome position Chr8:34817933-34818043 [+]
Reference genome RefGen_v4
Source SRR2089707
Length 24
Mature sequence(if miRNA) 1 - GGUAUGCGAGUGGAGGUGGGGUUU - 24
Stem-loop(if miRNA) --GGUAU     U     U           G    AA    AA   --  UG    A
       GCGAG GGAGG GGGGUUUUGCU CAUG  GUCG  GCU  GC  CGUU G
       ||||| ||||| ||||||||||| ||||  ||||  |||  ||  ||||
       UGCUU CUUCC CUCCAAAGCGG GUAC  UAGC  CGG  CG  GUAG G
GGUUAGG     -     C           A    AG    AA   CU  GU    G
Stem-loop sequence GGUAUGCGAGUGGAGGUGGGGUUUUGCUGCAUGAAGUCGAAGCUGCUGCGUUAGGGGAUGUGGCUCGGCAACGAUGACAUGAGGCGAAACCUCCCCUUCUUCGUGGAUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT070173.2
ncRNA:24   UUUGGGG-UGGAGGUGAGCGUAUGG   1
  |||||||-|||||||||||||||||
targets:514   AAACCCCCACCUCCACUCGCAUACC   538

2.0 Zea mays full-length cDNA clone ZM_BFc0151L06 mRNA, complete cds NA coding protein psRNATarget
BT055256.2
ncRNA:24   UUUGGGG-UGGAGGUGAGCGUAUGG   1
  |||||||-|||||||||||||||||
targets:302   AAACCCCCACCUCCACUCGCAUACC   326

2.0 Zea mays full-length cDNA clone ZM_BFc0058D06 mRNA, complete cds NA coding protein psRNATarget
BT066883.2
ncRNA:24   UUUGGGG-UGGAGGUGAGCGUAUGG   1
  |||||||-|||||||||||||||||
targets:514   AAACCCCCACCUCCACUCGCAUACC   538

2.0 Zea mays full-length cDNA clone ZM_BFb0090O12 mRNA, complete cds NA coding protein psRNATarget