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BaseInfo

ncRNA ID	novel_zma_miR15174
Species	Zea mays
Class	miRNA
Genome position	Chr8:25110483-25110668 [-]
Reference genome	RefGen_v4
Source	SRR2089707
Length	24
Mature sequence(if miRNA)	163 - UAACGGGUGUUUGGUUUCUAGGGA - 186
Stem-loop(if miRNA)	--   C                         U          A      A     C      UACA     AU               UAACC   UAA GGGUGUUUGGUUUCUAGGGACUAAU UUUAGUCCCU CAUUUU UUCCA UUUAGU    AAAUU  CAAAUAUAGAAACUA     U   ||| ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||    |||||  |||||||||||||||   AUU CCCACAAACCAAAGAUCCCUGAUUA AAAUCAGGGA GUAAAA AAGGU AAAUCA    UUUAA  GUUUAUAUCUUUGAU     U GA   C                         C          A      C     A      UAUA     CU               UUUAU
Stem-loop sequence	UAACGGGUGUUUGGUUUCUAGGGACUAAUUUUUAGUCCCUACAUUUUAUUCCACUUUAGUUACAAAAUUAUCAAAUAUAGAAACUAUAACCUUUAUUUUAGUUUCUAUAUUUGUCAAUUUAUAUACUAAAAUGGAACAAAAUGAAGGGACUAAACAUUAGUCCCUAGAAACCAAACACCCCUUAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001112602.2	ncRNA:24   AGGGAUCUUUGGUUUGUGGGCAAU   1   ||||||||||||||||||||*||* targets:1251   UCCCUAGAAACCAAACACCCCUUU   1274 Target Full Sequence	2.5	Zea mays ferric-chelate reductase (NADH)2 (fcr2), mRNA	NA	coding protein	psRNATarget
EU967664.1	ncRNA:24   AGGGAUCUUUGGUUUGUGGGCAAU   1   ||||||||||||||||||||*||* targets:1251   UCCCUAGAAACCAAACACCCCUUU   1274 Target Full Sequence	2.5	Zea mays clone 305169 NADH-cytochrome b5 reductase mRNA, complete cds	NA	coding protein	psRNATarget
XM_020546554.1	ncRNA:24   AGGGAUCUUUGGUUUGUGGGCAAU   1   ||||||||||||||||||||*||* targets:41   UCCCUAGAAACCAAACACCCCUUU   64 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109943471 (LOC109943471), mRNA	NA	coding protein	psRNATarget
EZ077632.1	ncRNA:24   AGGGAUCUUUGGUUUGUGGGCAAU   1   ||||||*|||||||||||||*||| targets:38   UCCCUACAAACCAAACACCCCUUA   61 Target Full Sequence	2.5	TSA: Zea mays contig13271, mRNA sequence	NA	coding protein	psRNATarget
NM_001151347.2	ncRNA:24   AGGGAUCUUUGGUUUGUGGGCAAU   1   ||||||*|||||||||||||*||| targets:53   UCCCUAUAAACCAAACACCCCUUA   76 Target Full Sequence	2.5	Zea mays hypothetical protein (LOC100277899), mRNA	NA	coding protein	psRNATarget