Search result

BaseInfo

ncRNA ID	novel_zma_miR15173
Species	Zea mays
Class	miRNA
Genome position	Chr8:27609405-27609493 [-]
Reference genome	RefGen_v4
Source	SRR2089707
Length	24
Mature sequence(if miRNA)	1 - UGGGACACUCGGCAAAGACUCCGU - 24
Stem-loop(if miRNA)	--   U G           C G      A    C         U A   GGA U UUUGCCGAGUG U UCAGGC GGCA UCGGCAAAG G A   ||| | ||||||||||| | |||||| |||| ||||||||| |   CCU A AAACGGCUCAC A GGUCCG CUGU AGCCGUUUC C C UG   C G           - G      -    U         - U
Stem-loop sequence	GGAUUGUUUGCCGAGUGCUGUCAGGCAGGCACUCGGCAAAGUGAACUCCUUUGCCGAUUGUCGCCUGGGACACUCGGCAAAGACUCCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238769.1	ncRNA:24   UGCCUCAGAAACGGCUCACAGGGU   1   |=|||||||||||||||||||||* targets:15   AUGGAGUCUUUGCCGAGUGUCCCU   38 Target Full Sequence	1.0	Sequence 4764 from Patent EP2985353	NA	coding protein	psRNATarget
JB167100.1	ncRNA:24   UGCCUCAGAAACGGCUCACAGGGU   1   |=|||||||||||||||||||||* targets:15   AUGGAGUCUUUGCCGAGUGUCCCU   38 Target Full Sequence	1.0	Sequence 4764 from Patent EP2559767	NA	coding protein	psRNATarget
HI406639.1	ncRNA:24   UGCCUCAGAAACGGCUCACAGGGU   1   |=|||||||||||||||||||||* targets:15   AUGGAGUCUUUGCCGAGUGUCCCU   38 Target Full Sequence	1.0	Sequence 4764 from Patent EP2074227	NA	coding protein	psRNATarget
EZ052892.1	ncRNA:24   UGCC---UCAGAAACGGCUCACAGGGU   1   *|||---||*||||||||||||||*|| targets:91   UCGGCAAAGGCUUUGCCGAGUGUCACA   117 Target Full Sequence	2.5	TSA: Zea mays contig54013, mRNA sequence	NA	coding protein	psRNATarget