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BaseInfo

ncRNA ID	novel_zma_miR15171
Species	Zea mays
Class	miRNA
Genome position	Chr8:60153792-60153855 [-]
Reference genome	RefGen_v4
Source	SRR2089707
Length	24
Mature sequence(if miRNA)	1 - CGGUCCGUGGCCUGGUGCGAGGCG - 24
Stem-loop(if miRNA)	--    U    A   --      G     C  GU   CCUC GCAC GGG  GCGGAU GUCCG GC  A   |||| |||| |||  |||||| ||||| ||   GGAG CGUG UCC  UGCCUG CAGGC CG  G GC    -    G   GG      G     -  GG
Stem-loop sequence	CCUCUGCACAGGGGCGGAUGGUCCGCGCGUAGGGGCCGGACGGUCCGUGGCCUGGUGCGAGGCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001196968.1	ncRNA:24   GCGGAGCGUGGUCCGGUGCCUGGC   1   ||||||||||||||||=||||||| targets:1307   CGCCUCGCACCAGGCCGCGGACCG   1330 Target Full Sequence	1.5	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
NM_001196968.1	ncRNA:24   GCGGAGCGUGGUCCGGUGCCUGGC   1   *|||*|||||||||||=||||||| targets:1234   AGCCGCGCACCAGGCCGCGGACCG   1257 Target Full Sequence	1.5	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
BT088349.1	ncRNA:24   GCGGAGCGUGGUCCGGUGCCUGGC   1   ||||||||||||||||=||||||| targets:1307   CGCCUCGCACCAGGCCGCGGACCG   1330 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
BT088349.1	ncRNA:24   GCGGAGCGUGGUCCGGUGCCUGGC   1   *|||*|||||||||||=||||||| targets:1234   AGCCGCGCACCAGGCCGCGGACCG   1257 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:24   GCGGAGCGUGGUCCGGUGCCUGGC   1   ||||||||||||||||=||||||| targets:2750   CGCCUCGCACCAGGCCGCGGACCG   2773 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:24   GCGGAGCGUGGUCCGGUGCCUGGC   1   *|||**||||||||||=||||||| targets:2677   AGCCGGGCACCAGGCCGCGGACCG   2700 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget