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BaseInfo

ncRNA ID novel_zma_miR15170
Species Zea mays
Class miRNA
Genome position Chr8:89666099-89666174 [-]
Reference genome RefGen_v4
Source SRR2089707
Length 23
Mature sequence(if miRNA) 54 - GUGUUGGGUCUUAGCUGACGGAC - 76
Stem-loop(if miRNA) --    UGG       C  A   A   GA  ---A  C  G
  GUGU   GUCUUAG UG CGG CUA  GC    GU GG U
  ||||   ||||||| || ||| |||  ||    || ||
  CACA   CAGGAUC AC GUC GGU  CG    CA CC G
CU    -CA       C  A   -   -G  GUGC  A  A
Stem-loop sequence GUGUUGGGUCUUAGCUGACGGACUAGAGCAGUCGGGUGACCAACCGUGGCGUGGCUGACACCUAGGACACACACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT064915.2
ncRNA:23   CAGGCAGUCGAUUCUGGGUUGUG   1
  |||||||||=|||||||||=|||
targets:335   GUCCGUCAGUUAAGACCCAGCAC   357

2.5 Zea mays full-length cDNA clone ZM_BFc0012F07 mRNA, complete cds NA coding protein psRNATarget