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BaseInfo

ncRNA ID	novel_zma_miR15139
Species	Zea mays
Class	miRNA
Genome position	Chr6:146394803-146394897 [-]
Reference genome	RefGen_v4
Source	SRR2089707
Length	24
Mature sequence(if miRNA)	72 - GGCCUUAGGGCCGGACUGUCCGCA - 95
Stem-loop(if miRNA)	--G      G  C            ----------A UC      A    AA    GCCUUA GG CGGACUGUCCGC           G  CUGACC GAGG  G    |||||| || ||||||||||||           |  |||||| ||||  G    CGGAAU UC GCCUGGCAGGCG           C  GACUGG CUUC  U GCG      G  C            GAUAUUAAGUC CU      G    GG
Stem-loop sequence	GGCCUUAGGGCCGGACUGUCCGCAGUCCUGACCAGAGGAAGGUGGCUUCGGGUCAGUCCCUGAAUUAUAGGCGGACGGUCCGCCUGUAAGGCGCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008672136.2	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   ||||||||||||||||||=||||| targets:1576   UGCGGACAGUCCGGCCCUGAGGCC   1599 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103647624 (LOC103647624), mRNA	NA	coding protein	psRNATarget
XM_008658706.2	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   |||||||=||||||||||=||||| targets:1387   UGCGGACGGUCCGGCCCUGAGGCC   1410 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103636343 (LOC103636343), mRNA	NA	coding protein	psRNATarget
EU942898.1	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   *|||||||||||||||||=||||| targets:118   GGCGGACAGUCCGGCCCUGAGGCC   141 Target Full Sequence	1.5	Zea mays clone 1544698 mRNA sequence	NA	coding protein	psRNATarget
EU974386.1	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   *|||||||||||||||||=||||| targets:807   GGCGGACAGUCCGGCCCUGAGGCC   830 Target Full Sequence	1.5	Zea mays clone 447822 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196761.1	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   *|||||||||||||||||=||||| targets:844   GGCGGACAGUCCGGCCCUGAGGCC   867 Target Full Sequence	1.5	Zea mays uncharacterized LOC100502284 (LOC100502284), mRNA	NA	coding protein	psRNATarget
BT087630.1	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   *|||||||||||||||||=||||| targets:844   GGCGGACAGUCCGGCCCUGAGGCC   867 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0140K18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176396.2	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   *|||||||||||||||||=||||| targets:1015   CGCGGACAGUCCGGCCCUGAGGCC   1038 Target Full Sequence	1.5	Zea mays Amidohydrolase family (LOC100383761), mRNA	NA	coding protein	psRNATarget
BT068223.1	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   *|||||||||||||||||=||||| targets:1015   CGCGGACAGUCCGGCCCUGAGGCC   1038 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0087M02 mRNA, complete cds	NA	coding protein	psRNATarget
EU943239.1	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   *||||||=||||||||||=||||| targets:285   CGCGGACGGUCCGGCCCUGAGGCC   308 Target Full Sequence	2.5	Zea mays clone 1589479 mRNA sequence	NA	coding protein	psRNATarget
EU949855.1	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   *||||||=||||||||||=||||| targets:373   GGCGGACGGUCCGGCCCUGAGGCC   396 Target Full Sequence	2.5	Zea mays clone 449025 mRNA sequence	NA	coding protein	psRNATarget
BT062567.1	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   *||||||=||||||||||=||||| targets:1311   CGCGGACGGUCCGGCCCUGAGGCC   1334 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0315B06 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174685.1	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   *||||||=||||||||||=||||| targets:1311   CGCGGACGGUCCGGCCCUGAGGCC   1334 Target Full Sequence	2.5	Zea mays uncharacterized LOC100381908 (LOC100381908), mRNA	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   *||||||=||||||||||=||||| targets:2168   GGCGGACGGUCCGGCCCUGAGGCC   2191 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020540221.1	ncRNA:24   ACGCCUGUCAGGCCGGG-AUUCCGG   1   *||||||||||||||||-||||||| targets:95   CGCGGACAGUCCGGCCCCUAAGGCC   119 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC103630887 (LOC103630887), mRNA	NA	coding protein	psRNATarget
BT062568.1	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   *||||||*||||||||||=||||| targets:1398   GGCGGACUGUCCGGCCCUGAGGCC   1421 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0315C08 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174686.1	ncRNA:24   ACGCCUGUCAGGCCGGGAUUCCGG   1   *||||||*||||||||||=||||| targets:1398   GGCGGACUGUCCGGCCCUGAGGCC   1421 Target Full Sequence	2.5	Zea mays Cysteine-rich receptor-like protein kinase 10 (LOC100381909), mRNA	NA	coding protein	psRNATarget