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BaseInfo

ncRNA ID	novel_zma_miR15133
Species	Zea mays
Class	miRNA
Genome position	Chr6:161194247-161194303 [+]
Reference genome	RefGen_v4
Source	SRR2089707
Length	24
Mature sequence(if miRNA)	1 - ACUCGGCAAACAGUGCAUCGGCAA - 24
Stem-loop(if miRNA)	--A         C     A         A    CUCGGCAAA AGUGC UCGGCAAAG C    ||||||||| ||||| |||||||||    GGGCUGUUU UCAUG AGCCGUUUC U CAC         U     -         U
Stem-loop sequence	ACUCGGCAAACAGUGCAUCGGCAAAGACUUCUUUGCCGAGUACUUUUUGUCGGGCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008680068.2	ncRNA:24   AACGGCUACGUGACAAACGGCUCA   1   ||||||||||||||||||=||||* targets:173   UUGCCGAUGCACUGUUUGUCGAGC   196 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103653106 (LOC103653106), mRNA	NA	coding protein	psRNATarget
BT064124.1	ncRNA:24   AACGGCUACGUGACAAACGGCUCA   1   ****||||||||||*||||||||* targets:872   CCUACGAUGCACUGGUUGCCGAGG   895 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0139J05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154463.2	ncRNA:24   AACGGCUACGUGACAAACGGCUCA   1   ****||||||||||*||||||||* targets:1031   CCUACGAUGCACUGGUUGCCGAGG   1054 Target Full Sequence	2.5	Zea mays putative phototropic-resoponsive NPH3 family protein (LOC100281544), mRNA	NA	coding protein	psRNATarget
EU957055.1	ncRNA:24   AACGGCUACGUGACAAACGGCUCA   1   ****||||||||||*||||||||* targets:1032   CCUACGAUGCACUGGUUGCCGAGG   1055 Target Full Sequence	2.5	Zea mays clone 1581425 signal transducer mRNA, complete cds	NA	coding protein	psRNATarget
XM_008669709.2	ncRNA:24   AACGGCUACGUGACAAACGGCUCA   1   ****||||||||||*||||||||* targets:1278   CCUACGAUGCACUGGUUGCCGAGG   1301 Target Full Sequence	2.5	PREDICTED: Zea mays putative phototropic-resoponsive NPH3 family protein (Orphan215), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008669706.2	ncRNA:24   AACGGCUACGUGACAAACGGCUCA   1   ****||||||||||*||||||||* targets:1281   CCUACGAUGCACUGGUUGCCGAGG   1304 Target Full Sequence	2.5	PREDICTED: Zea mays putative phototropic-resoponsive NPH3 family protein (Orphan215), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020547711.1	ncRNA:24   AACGGCUACGUGACAAACGGCUCA   1   ****||||||||||*||||||||* targets:1289   CCUACGAUGCACUGGUUGCCGAGG   1312 Target Full Sequence	2.5	PREDICTED: Zea mays putative phototropic-resoponsive NPH3 family protein (Orphan215), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008669707.2	ncRNA:24   AACGGCUACGUGACAAACGGCUCA   1   ****||||||||||*||||||||* targets:1292   CCUACGAUGCACUGGUUGCCGAGG   1315 Target Full Sequence	2.5	PREDICTED: Zea mays putative phototropic-resoponsive NPH3 family protein (Orphan215), transcript variant X2, mRNA	NA	coding protein	psRNATarget