Search result

BaseInfo

ncRNA ID	osa-miRf11110-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - GGUGUUACCAAUCGGGACUAAAGAU - NA
Stem-loop(if miRNA)	AA    -  UC CUAUCUUUAGUCCCGGUUGGUAACACCAAUCGGGA  AAAG AU  C |||||||||||||||||||||||||||||||||||  |||| || GAUAGAAAUCAGGGCUAACCAUUGUGGUUGGUCCU  UUUC UA  C                                    CA    G  UA
Stem-loop sequence	CUAUCUUUAGUCCCGGUUGGUAACACCAAUCGGGAAAAAAGAUUCCCAUAUGCUUUACUCCUGGUUGGUGUUACCAAUCGGGACUAAAGAUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB164982.1	ncRNA:25   UAGAAAUCAGGGCUAACCAUUGUGG   1   |||||||||||||||||||||=||| targets:124   AUCUUUAGUCCCGAUUGGUAAUACC   148 Target Full Sequence	1.5	Sequence 2646 from Patent EP2559767	NA	coding protein	psRNATarget
HI404521.1	ncRNA:25   UAGAAAUCAGGGCUAACCAUUGUGG   1   |||||||||||||||||||||=||| targets:124   AUCUUUAGUCCCGAUUGGUAAUACC   148 Target Full Sequence	1.5	Sequence 2646 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236651.1	ncRNA:25   UAGAAAUCAGGGCUAACCAUUGUGG   1   |||||||||||||||||||||=||| targets:124   AUCUUUAGUCCCGAUUGGUAAUACC   148 Target Full Sequence	1.5	Sequence 2646 from Patent EP2985353	NA	coding protein	psRNATarget
XM_015779829.1	ncRNA:25   UAGAAAUCAGGGCUAACCAUUGUGG   1   |||||||||||||=||||||||||| targets:1701   AUCUUUAGUCCCGGUUGGUAACACC   1725 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335182 (LOC4335182), mRNA	uncharacterized LOC4335182(LOC4335182)	coding protein	psRNATarget
AK289098.1	ncRNA:25   UAGAAAUCAGGGCUAACCAUUGUGG   1   |||||||||||||=||||||||||| targets:239   AUCUUUAGUCCCGGUUGGUAACACC   263 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288734.1	ncRNA:25   UAGAAAUCAGGGCUAACCAUUGUGG   1   |||||||||||||=||||||||||| targets:48   AUCUUUAGUCCCGGUUGGUAACACC   72 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence	NA	coding protein	psRNATarget
AK121472.1	ncRNA:25   UAGAAAUCAGGGCUAACCAUUGUGG   1   |||||||||=|||=||||||||||| targets:2061   AUCUUUAGUUCCGGUUGGUAACACC   2085 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023148H10, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:25   UAGAAAUCAGGGCUAACCAUUGUGG   1   ||||||||*||||=||||||||||| targets:1312   AUCUUUAGCCCCGGUUGGUAACACC   1336 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK121178.1	ncRNA:25   UAGAAAUCAGGGCUAACCAUUGUGG   1   ***|**|||||=|=||||||||||| targets:1936   CCAUGAAGUCCUGGUUGGUAACACC   1960 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget
AK288224.1	ncRNA:25   UAGAAAUCAGGGCUAACCAUUGUGG   1   |***|||||||||=||||||||||| targets:1844   AAACUUAGUCCCGGUUGGUAACACC   1868 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence	NA	coding protein	psRNATarget
AK288624.1	ncRNA:25   UAGAAAUCAGGGCUAACCAUUGUGG   1   ||=|*||||||=|=||||||||||| targets:4997   AUUUCUAGUCCUGGUUGGUAACACC   5021 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget