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BaseInfo

ncRNA ID ath-miRf10159-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UCGACCCCCUGGUCGAGUAU - NA
Stem-loop(if miRNA)     AC           CCA     --U   -    C  CACC   CUCGACCCCCUGGUCGAGUGACUUUGGAGCCAUUCUU
GAAG  AUACUCGACCA   GGUCG   GUG CAUC AG    AUA                                     C
||||  |||||||||||   |||||   ||| |||| ||    |||                                     C
CUUC  UAUGAGCUGGU   CCAGC   CGC GUAG UC    UCG                                     C
    AC           CCC     UAC   A    C  ---A   GACUCGACUCCUAUGAGCUGAUCCCCCAGCUCAUCUA
Stem-loop sequence GAAGACAUACUCGACCACCAGGUCGUGUGCAUCCAGCACCAUACUCGACCCCCUGGUCGAGUGACUUUGGAGCCAUUCUUCCCAUCUACUCGACCCCCUAGUCGAGUAUCCUCAGCUCAGGCUACUCGAUGACGCCAUCGACCCCCUGGUCGAGUAUCACUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183311.1
ncRNA:20   UAUGAGCUGGUCCCCCAGCU   1
  *|||||||||||||||||||
targets:435   CUACUCGACCAGGGGGUCGA   454

0.0 Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence NA coding protein psRNATarget