ncRNA ID | novel_zma_miR15126 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:9975256-9975427 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089707 |
Length | 24 |
Mature sequence(if miRNA) | 149 - CUUAUAUAGUGGGACGGAGGGAGU - 172 |
Stem-loop(if miRNA) |
--             GG                     UA   UU UC   C  UAUAAGGCGU   C C       AUAC    A   UCCCUCCGUCUCA  AUAUAAGGCGUAACCACUUUU  UUC  G  CCA GA          GCU U UCUAUAU    GUAU U   |||||||||||||  |||||||||||||||||||||  |||  |  ||| ||          ||| | |||||||    ||||   AGGGAGGCAGGGU  UAUAUUCCGUGUUGGUGGAGG  AAG  U  GGU CU          UGA A AGAUAUG    CGUA C UG             GA                     CC   UU CU   U  UUACAUAAAU   C C       GUAA    G |
Stem-loop sequence | UCCCUCCGUCUCAGGAUAUAAGGCGUAACCACUUUUUAUUCUUGUCCCACGAUAUAAGGCGUGCUCUCUCUAUAUAUACGUAUAUCGAUGCAAUGGUAUAGACACAGUUAAAUACAUUUCUUGGUCUUUGAACCGGAGGUGGUUGUGCCUUAUAUAGUGGGACGGAGGGAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU974289.1 |
|
1.5 | Zea mays clone 445101 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_020546407.1 |
|
2.5 | PREDICTED: Zea mays zinc finger BED domain-containing protein DAYSLEEPER-like (LOC109943429), mRNA | NA | coding protein | psRNATarget |