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BaseInfo

ncRNA ID novel_zma_miR15118
Species Zea mays
Class miRNA
Genome position Chr5:190704448-190704516 [-]
Reference genome RefGen_v4
Source SRR2089707
Length 24
Mature sequence(if miRNA) 46 - GGACUCGGGCUAGGUCCUGGAAGA - 69
Stem-loop(if miRNA) --  A      - UA        AAGAC    AACU
  GG CUCGGG C  GGUCCUGG     GGCG    C
  || |||||| |  ||||||||     ||||
  UC GGGCUC G  UCAGGAUC     CCGC    C
GA  -      A GC        -CAGC    CUCA
Stem-loop sequence GGACUCGGGCUAGGUCCUGGAAGACGGCGAACUCCACUCCGCCCGACCUAGGACUCGGACUCGGGCUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008656355.2
ncRNA:24   AGAAGGUCCUGGAUCGGGCUCAGG   1
  ****=||||=||||||=|||||||
targets:2663   CGCAUCAGGGCCUAGCUCGAGUCC   2686

2.5 PREDICTED: Zea mays ethylene-overproduction protein 1 (LOC103634507), mRNA NA coding protein psRNATarget