ncRNA ID | novel_zma_miR15117 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:22201774-22201940 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089707 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAUUGACGAUUUUGCCCCUAG - 21 |
Stem-loop(if miRNA) |
--              C    AG       C    UUAGU        CU                C      A        UAAA   AAUUGACGAUUUUG CCCU  GUGGAAA UGAA     GCAGAGUU  GUUUGUCUAUGUUUAG UUUGAG AAUAUUUU    C   |||||||||||||| ||||  ||||||| ||||     ||||||||  |||||||||||||||| |||||| ||||||||   UUAACUGCUAAAAC GGGA  CACUUUU ACUU     UGUCUCGG  CAAGCAGAUACGAGUU AAACUC UUAUAAAG    C AC              U    CU       U    -----        AU                A      C        UGUA |
Stem-loop sequence | AAUUGACGAUUUUGCCCCUAGGUGGAAACUGAAUUAGUGCAGAGUUCUGUUUGUCUAUGUUUAGCUUUGAGAAAUAUUUUUAAACCAUGUGAAAUAUUCCUCAAAAUUGAGCAUAGACGAACUAGGCUCUGUUUCAUUUUUCACUCAGGGUCAAAAUCGUCAAUUCA |