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BaseInfo

ncRNA ID novel_zma_miR15117
Species Zea mays
Class miRNA
Genome position Chr5:22201774-22201940 [+]
Reference genome RefGen_v4
Source SRR2089707
Length 21
Mature sequence(if miRNA) 1 - AAUUGACGAUUUUGCCCCUAG - 21
Stem-loop(if miRNA) --              C    AG       C    UUAGU        CU                C      A        UAAA
  AAUUGACGAUUUUG CCCU  GUGGAAA UGAA     GCAGAGUU  GUUUGUCUAUGUUUAG UUUGAG AAUAUUUU    C
  |||||||||||||| ||||  ||||||| ||||     ||||||||  |||||||||||||||| |||||| ||||||||
  UUAACUGCUAAAAC GGGA  CACUUUU ACUU     UGUCUCGG  CAAGCAGAUACGAGUU AAACUC UUAUAAAG    C
AC              U    CU       U    -----        AU                A      C        UGUA
Stem-loop sequence AAUUGACGAUUUUGCCCCUAGGUGGAAACUGAAUUAGUGCAGAGUUCUGUUUGUCUAUGUUUAGCUUUGAGAAAUAUUUUUAAACCAUGUGAAAUAUUCCUCAAAAUUGAGCAUAGACGAACUAGGCUCUGUUUCAUUUUUCACUCAGGGUCAAAAUCGUCAAUUCA