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BaseInfo

ncRNA ID	novel_zma_miR15112
Species	Zea mays
Class	miRNA
Genome position	Chr5:182986732-182986836 [+]
Reference genome	RefGen_v4
Source	SRR2089707
Length	24
Mature sequence(if miRNA)	82 - UGACUAAAGUGGAAUAGAAUGGAG - 105
Stem-loop(if miRNA)	--                     UA            U CG       UAAC   CCAUUUUAUUCCACUUUAGUC  UAAAUUGUCAAA A  GAAACUA    U   |||||||||||||||||||||  |||||||||||| |  |||||||    C   GGUAAGAUAAGGUGAAAUCAG  AUUUAACAGUUU U  CUUUGAU    U GA                     UG            U AU       UUUA
Stem-loop sequence	CCAUUUUAUUCCACUUUAGUCUAUAAAUUGUCAAAUACGGAAACUAUAACUCUAUUUUAGUUUCUAUUUUUGACAAUUUAGUGACUAAAGUGGAAUAGAAUGGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008647122.2	ncRNA:24   GAGGUAAGAUAAGGUGAAAUCAGU   1   |||||||=|||||||||||||||* targets:2994   CUCCAUUUUAUUCCACUUUAGUCU   3017 Target Full Sequence	2.0	PREDICTED: Zea mays ribonuclease J (LOC103626744), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008647123.2	ncRNA:24   GAGGUAAGAUAAGGUGAAAUCAGU   1   |||||||=|||||||||||||||* targets:2605   CUCCAUUUUAUUCCACUUUAGUCU   2628 Target Full Sequence	2.0	PREDICTED: Zea mays ribonuclease J (LOC103626744), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020552869.1	ncRNA:24   GAGGUAAGAUAAGGUGAAAUCAGU   1   |||||*|=|||||||||||||||| targets:1664   CUCCAAUUUAUUCCACUUUAGUCA   1687 Target Full Sequence	2.0	PREDICTED: Zea mays NADPH:adrenodoxin oxidoreductase, mitochondrial-like (LOC109946102), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020550132.1	ncRNA:24   GAGGUAAGAUAAGGUGAAAUCAGU   1   |||||*|=|||||||||||||||| targets:25   CUCCAAUUUAUUCCACUUUAGUCA   48 Target Full Sequence	2.0	PREDICTED: Zea mays putrescine hydroxycinnamoyltransferase 1-like (LOC103649816), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU957896.1	ncRNA:24   GAG-GUAAGAUAAGGUGAAAUCAGU   1   ||=-||||=||||||||||||||=| targets:1274   CUUACAUUUUAUUCCACUUUAGUUA   1298 Target Full Sequence	2.5	Zea mays clone 1630391 mRNA sequence	NA	coding protein	psRNATarget
XM_020549268.1	ncRNA:24   GAGGUAAGAUAAGGUGAAAUCAGU   1   *||||*|=|||||||||||||||| targets:1147   AUCCAAUUUAUUCCACUUUAGUCA   1170 Target Full Sequence	2.0	PREDICTED: Zea mays ethylene-responsive transcription factor ERF039 (LOC100283619), mRNA	NA	coding protein	psRNATarget