ncRNA ID | osa-miRf11108-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UUUCCGUGCGGUCCUCUUAA - NA |
Stem-loop(if miRNA) |
  G       A        G             A        --------   C G GC GUCCAUU AAGAGGAC GCACGGAAAAAUC AUUUUUCC        GUG G U || ||||||| |||||||| ||||||||||||| ||||||||        ||| | CG CAGGUAA UUCUCCUG CGUGCCUUUUUAG UAAAAAGG        UAC C A   A       A        G             C        GUCUUCUU   U A |
Stem-loop sequence | GCGGUCCAUUAAAGAGGACGGCACGGAAAAAUCAAUUUUUCCGUGCGGUAACUCAUUUCUUCUGGGAAAAAUCGAUUUUUCCGUGCGGUCCUCUUAAAUGGACAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HI404453.1 |
|
1.0 | Sequence 2578 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
JB164914.1 |
|
1.0 | Sequence 2578 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
LQ236583.1 |
|
1.0 | Sequence 2578 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
AK288501.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090041C22, full insert sequence | NA | coding protein | psRNATarget | |||||||||
CT835681.1 |
|
3.0 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA033C01, full insert sequence | NA | coding protein | psRNATarget |