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BaseInfo

ncRNA ID novel_zma_miR15102
Species Zea mays
Class miRNA
Genome position Chr4:162207021-162207076 [-]
Reference genome RefGen_v4
Source SRR2089707
Length 24
Mature sequence(if miRNA) 33 - ACUCGGCAAACAGUACAUCGGCAA - 56
Stem-loop(if miRNA) -AC    C   C     A         C
   UCGG AAA AGUAC UCGGCAAAG C
   |||| ||| ||||| |||||||||
   GGCU UUU UCGUG AGCCGUUUC U
ACU    C   U     -         U
Stem-loop sequence ACUCGGCAAACAGUACAUCGGCAAAGCCUUCUUUGCCGAGUGCUUUUUCUCGGUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ099746.1
ncRNA:24   AACGGCUACAUGACAAACGGCUCA   1
  |||=||||*||||||||*||||||
targets:89   UUGUCGAUAUACUGUUUACCGAGU   112

2.5 TSA: Zea mays contig35401, mRNA sequence NA coding protein psRNATarget