Search result

BaseInfo

ncRNA ID	novel_zma_miR15101
Species	Zea mays
Class	miRNA
Genome position	Chr8:64820181-64820306 [-]
Reference genome	RefGen_v4
Source	SRR1583943
Length	24
Mature sequence(if miRNA)	103 - AGGUCUGUUCGGUUAUUCCGGAUU - 126
Stem-loop(if miRNA)	--A               UC    UUCAACAUCC    A      CU   AAUGA     U   U    GGUCUGUUCGGUUAU  CGGA          GAAC AUUCUA  UGA     UAGUU AAU U    |||||||||||||||  ||||          |||| ||||||  |||     ||||| |||    CCGGACAAGCCAAUG  GCCU          UUUG UAAGAU  ACU     AUUAA UUA G UCC               UA    UGCUCUGAUC    A      CU   ----A     U   U
Stem-loop sequence	AGGUCUGUUCGGUUAUUCCGGAUUCAACAUCCGAACAAUUCUACUUGAAAUGAUAGUUUAAUUUGUAUUUAAUUAAUCAUCUAGAAUAGUUUCUAGUCUCGUUCCGAUGUAACCGAACAGGCCCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI403046.1	ncRNA:24   UUAGGCCUUAUUGGCUUGUCUGGA   1   |*|||||*|*|||||||||||||* targets:105   AUUCCGGUACAACCGAACAGACCC   128 Target Full Sequence	3.0	Sequence 1171 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235176.1	ncRNA:24   UUAGGCCUUAUUGGCUUGUCUGGA   1   |*|||||*|*|||||||||||||* targets:105   AUUCCGGUACAACCGAACAGACCC   128 Target Full Sequence	3.0	Sequence 1171 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235211.1	ncRNA:24   UUAGGCCUUAUUGGCUUGUCUGGA   1   |*|||||*|*|||||||||||||* targets:105   AUUCCGGUACAACCGAACAGACCC   128 Target Full Sequence	3.0	Sequence 1206 from Patent EP2985353	NA	coding protein	psRNATarget
HI403081.1	ncRNA:24   UUAGGCCUUAUUGGCUUGUCUGGA   1   |*|||||*|*|||||||||||||* targets:105   AUUCCGGUACAACCGAACAGACCC   128 Target Full Sequence	3.0	Sequence 1206 from Patent EP2074227	NA	coding protein	psRNATarget
JB163542.1	ncRNA:24   UUAGGCCUUAUUGGCUUGUCUGGA   1   |*|||||*|*|||||||||||||* targets:105   AUUCCGGUACAACCGAACAGACCC   128 Target Full Sequence	3.0	Sequence 1206 from Patent EP2559767	NA	coding protein	psRNATarget
JB163507.1	ncRNA:24   UUAGGCCUUAUUGGCUUGUCUGGA   1   |*|||||*|*|||||||||||||* targets:105   AUUCCGGUACAACCGAACAGACCC   128 Target Full Sequence	3.0	Sequence 1171 from Patent EP2559767	NA	coding protein	psRNATarget