ncRNA ID | novel_zma_miR15100 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:69902489-69902668 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583941 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CACAUCCGGACAGAGUACACU - 21 |
Stem-loop(if miRNA) |
--      A                                             G                    G  G  G       U   UGUACU UGUCCGGAUGUGUGGUCACAAAAUUUAAAGCCGCCCCGGCUUCAU UGUGUGCUUCUCUUCUCUUA GU GG UGCUAAG G   |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || || |||||||   ACAUGA ACAGGCCUACACACCAGUGUUUUAAAUUUCGGCGGGGCUGAAGUA ACACGCGAAGAGAAGAGAAU CA CC AUGAUUC A UC      G                                             G                    A  G  G       U |
Stem-loop sequence | UGUACUAUGUCCGGAUGUGUGGUCACAAAAUUUAAAGCCGCCCCGGCUUCAUGUGUGUGCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGCCGACAUAAGAGAAGAGAAGCGCACAGAUGAAGUCGGGGCGGCUUUAAAUUUUGUGACCACACAUCCGGACAGAGUACACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020538582.1 |
|
1.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020538581.1 |
|
1.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X1, mRNA | NA | coding protein | psRNATarget |