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BaseInfo

ncRNA ID	novel_zma_miR15094
Species	Zea mays
Class	miRNA
Genome position	Chr4:242145579-242145695 [-]
Reference genome	RefGen_v4
Source	SRR2089707
Length	21
Mature sequence(if miRNA)	1 - AAAACGACUUACAAUUUGGAA - 21
Stem-loop(if miRNA)	--         U                      A    -     ----------U      CA   CCAAAUUGU AGUCGUUUUGGCUUUUCUAGGU CAUG GUUUU           UAUAUC  U   ||||||||| |||||||||||||||||||||| |||| |||||           ||||||   GGUUUAACA UCAGCAAAACCGAAAAGAUCUA GUAU CAAAA           AUAUAG  U AA         U                      A    U     UGAUACACAAC      AU
Stem-loop sequence	CCAAAUUGUUAGUCGUUUUGGCUUUUCUAGGUACAUGGUUUUUUAUAUCCAUUUAGAUAUACAACACAUAGUAAAACUUAUGAAUCUAGAAAAGCCAAAACGACUUACAAUUUGGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT041731.2	ncRNA:21   AAGGUUUAACAUUCAGCAAAA   1   |||=||||||||||||||||* targets:854   UUCUAAAUUGUAAGUCGUUUA   874 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0040J03 mRNA, complete cds	NA	coding protein	psRNATarget
BT086175.2	ncRNA:21   AAGGUUUAACAUUCAGCAAAA   1   ||*|||||||||||||||||| targets:1501   UUGCAAAUUGUAAGUCGUUUU   1521 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0125C17 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008683130.2	ncRNA:21   AAGGUUUAACAUUCAGCAAAA   1   ||||||||||*|||||||||| targets:1918   UUCCAAAUUGGAAGUCGUUUU   1938 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100272378 (LOC100272378), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008683130.2	ncRNA:21   AAGGUUUAACAUUCAGCAAAA   1   *|||||||||*|||||||||| targets:1991   AUCCAAAUUGGAAGUCGUUUU   2011 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100272378 (LOC100272378), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020553141.1	ncRNA:21   AAGGUUUAACAUUCAGCAAAA   1   ||||||||||*|||||||||| targets:1624   UUCCAAAUUGGAAGUCGUUUU   1644 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100272378 (LOC100272378), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT035108.1	ncRNA:21   AAGGUUUAACAUUCAGCAAAA   1   |||||||*|||||||=||||| targets:598   UUCCAAAAUGUAAGUUGUUUU   618 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0040A21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138148.1	ncRNA:21   AAGGUUUAACAUUCAGCAAAA   1   |||||||*|||||||=||||| targets:598   UUCCAAAAUGUAAGUUGUUUU   618 Target Full Sequence	2.5	Zea mays uncharacterized LOC100192974 (LOC100192974), mRNA	NA	coding protein	psRNATarget
BT024149.1	ncRNA:21   AAGGUUUAACAUUCAGCAAAA   1   |||||||*|||||||=||||| targets:527   UUCCAAAAUGUAAGUUGUUUU   547 Target Full Sequence	2.5	Zea mays clone EL01N0440G06 mRNA sequence	NA	coding protein	psRNATarget
XM_020549736.1	ncRNA:21   AAGGUUUAACAUUCAGCAAAA   1   |*||||||||||||||*|||| targets:1846   UCCCAAAUUGUAAGUCAUUUU   1866 Target Full Sequence	1.5	PREDICTED: Zea mays CTD-phosphatase-like protein (LOC100283041), transcript variant X4, mRNA	NA	coding protein	psRNATarget