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BaseInfo

ncRNA ID novel_zma_miR15090
Species Zea mays
Class miRNA
Genome position Chr8:116890931-116891045 [-]
Reference genome RefGen_v4
Source SRR1583943
Length 24
Mature sequence(if miRNA) 1 - CUCCAAUACUCUUGUUUCCAAACA - 24
Stem-loop(if miRNA) --       CA             A                                A
  UUUGGAA  AAGAGUAUUGGAG GGAUUGAGGGGGCUAUAAUCCCUUGUUAUUUA U
  |||||||  ||||||||||||| ||||||||||||||||||||||||||||||||
  AAACCUU  UUCUCAUAACCUC CCUAACUCCCCCGAUAUUAGGGAACGAUAAGU A
AC       UG             -                                U
Stem-loop sequence UUUGGAACAAAGAGUAUUGGAGAGGAUUGAGGGGGCUAUAAUCCCUUGUUAUUUAAUAUUGAAUAGCAAGGGAUUAUAGCCCCCUCAAUCCCUCCAAUACUCUUGUUUCCAAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU958579.1
ncRNA:24   ACAAACCUUUGUUCUCAUAACCUC   1
  |||||||||=*|||||||||||||
targets:21   UGUUUGGAAGAAAGAGUAUUGGAG   44

2.0 Zea mays clone 1703813 hypothetical protein mRNA, complete cds NA coding protein psRNATarget