ncRNA ID | novel_zma_miR15090 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:116890931-116891045 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583943 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUCCAAUACUCUUGUUUCCAAACA - 24 |
Stem-loop(if miRNA) |
--       CA             A                                A   UUUGGAA  AAGAGUAUUGGAG GGAUUGAGGGGGCUAUAAUCCCUUGUUAUUUA U   |||||||  ||||||||||||| ||||||||||||||||||||||||||||||||   AAACCUU  UUCUCAUAACCUC CCUAACUCCCCCGAUAUUAGGGAACGAUAAGU A AC       UG             -                                U |
Stem-loop sequence | UUUGGAACAAAGAGUAUUGGAGAGGAUUGAGGGGGCUAUAAUCCCUUGUUAUUUAAUAUUGAAUAGCAAGGGAUUAUAGCCCCCUCAAUCCCUCCAAUACUCUUGUUUCCAAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU958579.1 |
|
2.0 | Zea mays clone 1703813 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |