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BaseInfo

ncRNA ID	novel_zma_miR15085
Species	Zea mays
Class	miRNA
Genome position	Chr3:67404718-67404836 [+]
Reference genome	RefGen_v4
Source	SRR2089707
Length	24
Mature sequence(if miRNA)	96 - AAUUGAAUAAAAUCUAGGGACUAA - 119
Stem-loop(if miRNA)	--       UC         CU       GUA    -                A         AGUCCCU  AUUUUAUUC  UUUUAGU   CAAA UUGCUAAAUAUAGAAA UAAAAUA   |||||||  |||||||||  |||||||   |||| |||||||||||||||| ||||||A   UCAGGGA  UAAAAUAAG  AAAAUCA   GUUU AACGGUUUAUAUCUUU AUUUUGA AA       UC         UU       -AG    U                G
Stem-loop sequence	AGUCCCUUCAUUUUAUUCCUUUUUAGUGUACAAAUUGCUAAAUAUAGAAAAUAAAAUAAAGUUUUAGUUUCUAUAUUUGGCAAUUUUGGAACUAAAAUUGAAUAAAAUCUAGGGACUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ052166.1	ncRNA:24   AAUCAGGGAUCUAAAAUAAGUUAA   1   ||||||||||||||||||||*||| targets:777   UUAGUCCCUAGAUUUUAUUCCAUU   800 Target Full Sequence	1.5	TSA: Zea mays contig53286, mRNA sequence	NA	coding protein	psRNATarget
NM_001112512.2	ncRNA:24   AAUCAGGGAUCUAAAAUAAGUUAA   1   ||||||||||*|||||||||*||| targets:1569   UUAGUCCCUACAUUUUAUUCUAUU   1592 Target Full Sequence	2.5	Zea mays Aldose reductase (pco147797a), mRNA	NA	coding protein	psRNATarget
XM_020542840.1	ncRNA:24   AAUCAGGGAUCUAAAAUAAGUUAA   1   ||||||||||*|||||||||*||| targets:997   UUAGUCCCUACAUUUUAUUCCAUU   1020 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103636172), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008667360.2	ncRNA:24   AAUCAGGGAUCUAAAAUAAGUUAA   1   ||||||||||*|||||||||*||| targets:1066   UUAGUCCCUAUAUUUUAUUCUAUU   1089 Target Full Sequence	2.5	PREDICTED: Zea mays GNAT transcription factor (LOC103644167), mRNA	NA	coding protein	psRNATarget
EZ060524.1	ncRNA:24   AAUCAGGGAUCUAAAAUAAGUUAA   1   ||||||||||*|||||||||*||| targets:69   UUAGUCCCUACAUUUUAUUCUAUU   92 Target Full Sequence	2.5	TSA: Zea mays contig61646, mRNA sequence	NA	coding protein	psRNATarget
EU946945.1	ncRNA:24   AAUCAGGGAUCUAAAAUAAGUUAA   1   *|||||=||**||||||||||||| targets:594   GUAGUCUCUCUAUUUUAUUCAAUU   617 Target Full Sequence	3.0	Zea mays clone 325236 mRNA sequence	NA	coding protein	psRNATarget