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BaseInfo

ncRNA ID	novel_zma_miR15083
Species	Zea mays
Class	miRNA
Genome position	Chr3:58337560-58337682 [+]
Reference genome	RefGen_v4
Source	SRR2089707
Length	21
Mature sequence(if miRNA)	103 - UUAUGUCCGACGGCUGGCAGA - 123
Stem-loop(if miRNA)	--UA G  A             G  A           - - C GGG            A  AC     U AG CCGUCGGACAUAA GU AUGUCCGACGG C C C   CAGCCGUCAGAC UA  A     | || ||||||||||||| || ||||||||||| | | |   |||||||||||| ||     G UC GGCAGCCUGUAUU CA UACAGGCUGCC G G G   GUCGGCAGUCUG AU  C AGAC G  -             G  A           A A A ACA            C  AA
Stem-loop sequence	UAUGAGACCGUCGGACAUAAGGUAAUGUCCGACGGCCCCGGGCAGCCGUCAGACAUAACACAAUACGUCUGACGGCUGACAGAGAGACCGUCGGACAUAACGUUAUGUCCGACGGCUGGCAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ093652.1	ncRNA:21   AGACGGUCGGCAGCCUGUAUU   1   |=||*||||||||||*||||| targets:74   UUUGACAGCCGUCGGUCAUAA   94 Target Full Sequence	2.5	TSA: Zea mays contig29302, mRNA sequence	NA	coding protein	psRNATarget
XM_020548257.1	ncRNA:21   AGACGGUCGGCAGCCUGUAUU   1   *|*|*|||||||||||||||| targets:2666   CCGGGCAGCCGUCGGACAUAA   2686 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X8, mRNA	NA	coding protein	psRNATarget
XM_020548255.1	ncRNA:21   AGACGGUCGGCAGCCUGUAUU   1   *|*|*|||||||||||||||| targets:2679   CCGGGCAGCCGUCGGACAUAA   2699 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020548256.1	ncRNA:21   AGACGGUCGGCAGCCUGUAUU   1   *|*|*|||||||||||||||| targets:2698   CCGGGCAGCCGUCGGACAUAA   2718 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_008673007.2	ncRNA:21   AGACGGUCGGCAGCCUGUAUU   1   *|*|*|||||||||||||||| targets:2825   CCGGGCAGCCGUCGGACAUAA   2845 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020548252.1	ncRNA:21   AGACGGUCGGCAGCCUGUAUU   1   *|*|*|||||||||||||||| targets:2830   CCGGGCAGCCGUCGGACAUAA   2850 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020548251.1	ncRNA:21   AGACGGUCGGCAGCCUGUAUU   1   *|*|*|||||||||||||||| targets:2839   CCGGGCAGCCGUCGGACAUAA   2859 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020548259.1	ncRNA:21   AGACGGUCGGCAGCCUGUAUU   1   *|*|*|||||||||||||||| targets:2874   CCGGGCAGCCGUCGGACAUAA   2894 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X10, mRNA	NA	coding protein	psRNATarget
XM_020548258.1	ncRNA:21   AGACGGUCGGCAGCCUGUAUU   1   *|*|*|||||||||||||||| targets:2908   CCGGGCAGCCGUCGGACAUAA   2928 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X9, mRNA	NA	coding protein	psRNATarget
XM_020548254.1	ncRNA:21   AGACGGUCGGCAGCCUGUAUU   1   *|*|*|||||||||||||||| targets:2919   CCGGGCAGCCGUCGGACAUAA   2939 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020548253.1	ncRNA:21   AGACGGUCGGCAGCCUGUAUU   1   *|*|*|||||||||||||||| targets:2933   CCGGGCAGCCGUCGGACAUAA   2953 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008671903.2	ncRNA:21   AGACGGUCGGCAGCCUGUAUU   1   ***|*|||||||||||||||= targets:1501   GACGGCAGCCGUCGGACAUAG   1521 Target Full Sequence	3.0	PREDICTED: Zea mays flavonoid 3'-monooxygenase (LOC103647360), mRNA	NA	coding protein	psRNATarget