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BaseInfo

ncRNA ID	novel_zma_miR15077
Species	Zea mays
Class	miRNA
Genome position	Chr3:178184983-178185150 [-]
Reference genome	RefGen_v4
Source	SRR2089707
Length	24
Mature sequence(if miRNA)	1 - GCCUUAUAUCUUGGGACGGAGGGA - 24
Stem-loop(if miRNA)	--                              CUCUGC   AAAGA   AGA      --UUUAA  G      UACCAC     -  A   CCUCCGUCCCAGGAUAUAAGGCGUAACCAC      UUC     CCA   AAUGUA       UU UCUCUA      UGCAU CG U   ||||||||||||||||||||||||||||||      |||     |||   ||||||       || ||||||      ||||| || G   GGAGGCAGGGUUCUAUAUUCCGCAUUGGUG      AAG     GGU   UUAUAU       GA AGAGAU      ACGUA GC U AG                              AAAAAU   AACAG   --G      UCCGCAC  G      ------     U  A
Stem-loop sequence	CCUCCGUCCCAGGAUAUAAGGCGUAACCACCUCUGCUUCAAAGACCAAGAAAUGUAUUUAAUUGUCUCUAUACCACUGCAUCGAUGUACGUAUGCAUAGAGAGAGCACGCCUUAUAUUGUGGGACAAGAAUAAAAAGUGGUUACGCCUUAUAUCUUGGGACGGAGGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU957638.1	ncRNA:24   AGGGAGGCAGGGUUCUAUAUUCCG   1   ||||||||||=||=|||||||||| targets:1857   UCCCUCCGUCUCAGGAUAUAAGGC   1880 Target Full Sequence	2.5	Zea mays clone 1600726 cytochrome P450 CYP78A54 mRNA, complete cds	NA	coding protein	psRNATarget
EU956983.1	ncRNA:24   AGGGAGGCAGGGUUCUAUAUUCCG   1   ||||||||||=||=|||||||||| targets:1938   UCCCUCCGUCUCAGGAUAUAAGGC   1961 Target Full Sequence	2.5	Zea mays clone 1579515 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147251.1	ncRNA:24   AGGGAGGCAGGGUUCUAUAUUCCG   1   ||||||||||=||=|||||||||| targets:1925   UCCCUCCGUCUCAGGAUAUAAGGC   1948 Target Full Sequence	2.5	Zea mays Regulator of Vps4 activity in the MVB pathway protein (LOC100272798), mRNA	NA	coding protein	psRNATarget
BT039461.1	ncRNA:24   AGGGAGGCAGGGUUCUAUAUUCCG   1   ||||||||||=||=|||||||||| targets:1925   UCCCUCCGUCUCAGGAUAUAAGGC   1948 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0014I07 mRNA, complete cds	NA	coding protein	psRNATarget