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BaseInfo

ncRNA ID	novel_zma_miR15070
Species	Zea mays
Class	miRNA
Genome position	Chr3:199532598-199532647 [+]
Reference genome	RefGen_v4
Source	SRR2089707
Length	24
Mature sequence(if miRNA)	27 - ACCGUUUAGAGGACGCUGCUAGAG - 50
Stem-loop(if miRNA)	--CC                 AUAU     AGCAGCGUCUUCUAAAU    A     |||||||||||||||||     UCGUCGCAGGAGAUUUG    A GAGA                 CCAA
Stem-loop sequence	CCAGCAGCGUCUUCUAAAUAUAUAAAACCGUUUAGAGGACGCUGCUAGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU975903.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*|||||||||||||||||||| targets:661   CUCCAGCAGCGUCCUCUAAACGGU   684 Target Full Sequence	0.0	Zea mays clone 504920 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
LQ238109.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*||||*||||||||||||||| targets:10   CUCCAGCAACGUCCUCUAAACGGU   33 Target Full Sequence	1.0	Sequence 4104 from Patent EP2985353	NA	coding protein	psRNATarget
HI405979.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*||||*||||||||||||||| targets:10   CUCCAGCAACGUCCUCUAAACGGU   33 Target Full Sequence	1.0	Sequence 4104 from Patent EP2074227	NA	coding protein	psRNATarget
JB166440.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*||||*||||||||||||||| targets:10   CUCCAGCAACGUCCUCUAAACGGU   33 Target Full Sequence	1.0	Sequence 4104 from Patent EP2559767	NA	coding protein	psRNATarget
JB166313.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*||||*||||||||||||||| targets:11   CUCCAGCAACGUCCUCUAAACGGU   34 Target Full Sequence	1.0	Sequence 3977 from Patent EP2559767	NA	coding protein	psRNATarget
HI405852.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*||||*||||||||||||||| targets:11   CUCCAGCAACGUCCUCUAAACGGU   34 Target Full Sequence	1.0	Sequence 3977 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237982.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*||||*||||||||||||||| targets:11   CUCCAGCAACGUCCUCUAAACGGU   34 Target Full Sequence	1.0	Sequence 3977 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238002.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*|||||||||||||||||*|| targets:6   CUCCAGCAGCGUCCUCUAAACAGU   29 Target Full Sequence	1.5	Sequence 3997 from Patent EP2985353	NA	coding protein	psRNATarget
HI405872.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*|||||||||||||||||*|| targets:6   CUCCAGCAGCGUCCUCUAAACAGU   29 Target Full Sequence	1.5	Sequence 3997 from Patent EP2074227	NA	coding protein	psRNATarget
JB166333.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*|||||||||||||||||*|| targets:6   CUCCAGCAGCGUCCUCUAAACAGU   29 Target Full Sequence	1.5	Sequence 3997 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238111.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*||||*||||||||||||||| targets:10   CUCCAGCAACGUCCUCUAAACGGU   33 Target Full Sequence	1.0	Sequence 4106 from Patent EP2985353	NA	coding protein	psRNATarget
HI405981.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*||||*||||||||||||||| targets:10   CUCCAGCAACGUCCUCUAAACGGU   33 Target Full Sequence	1.0	Sequence 4106 from Patent EP2074227	NA	coding protein	psRNATarget
JB166442.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*||||*||||||||||||||| targets:10   CUCCAGCAACGUCCUCUAAACGGU   33 Target Full Sequence	1.0	Sequence 4106 from Patent EP2559767	NA	coding protein	psRNATarget
EU945316.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*||||*||||||||||||||| targets:1316   CUCCAGCAACGUCCUCUAAACGGU   1339 Target Full Sequence	1.0	Zea mays clone 257973 mRNA sequence	NA	coding protein	psRNATarget
NM_001152204.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*=|||*|||=||||||||||| targets:813   CUCCGGCAACGUUCUCUAAACGGU   836 Target Full Sequence	2.5	Zea mays uncharacterized LOC100279180 (LOC100279180), mRNA	NA	coding protein	psRNATarget
EU977130.1	ncRNA:24   GAGAUCGUCGCAGGAGAUUUGCCA   1   |||*=|||*|||=||||||||||| targets:813   CUCCGGCAACGUUCUCUAAACGGU   836 Target Full Sequence	2.5	Zea mays clone 999810 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget