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BaseInfo

ncRNA ID	novel_zma_miR15063
Species	Zea mays
Class	miRNA
Genome position	Chr10:9581292-9581361 [-]
Reference genome	RefGen_v4
Source	SRR2089706
Length	24
Mature sequence(if miRNA)	47 - GGCGCGAGACGGAACACAAAGGGA - 70
Stem-loop(if miRNA)	--      A    GA    A    GAAAAAACAGCA   GGCGCG GACG  ACAC AAGG            A   |||||| ||||  |||| ||||   CCGCGU CUGU  UGUG UUCC            G AC      C    --    C    GGCGCAAAAGGG
Stem-loop sequence	GGCGCGAGACGGAACACAAAGGGAAAAAACAGCAAGGGGAAAACGCGGCCUUCGUGUUGUCCUGCGCCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ241641.1	ncRNA:24   AGGGAAACACAAGGCAGAGCGCGG   1   *|||||||||||||*||||||||| targets:43   CCCCUUUGUGUUCCAUCUCGCGCC   66 Target Full Sequence	1.5	Sequence 7636 from Patent EP2985353	NA	coding protein	psRNATarget
JB169972.1	ncRNA:24   AGGGAAACACAAGGCAGAGCGCGG   1   *|||||||||||||*||||||||| targets:43   CCCCUUUGUGUUCCAUCUCGCGCC   66 Target Full Sequence	1.5	Sequence 7636 from Patent EP2559767	NA	coding protein	psRNATarget
HI409511.1	ncRNA:24   AGGGAAACACAAGGCAGAGCGCGG   1   *|||||||||||||*||||||||| targets:43   CCCCUUUGUGUUCCAUCUCGCGCC   66 Target Full Sequence	1.5	Sequence 7636 from Patent EP2074227	NA	coding protein	psRNATarget
BT017984.1	ncRNA:24   AGGGAAACACAAGGCAGAGCGCGG   1   *||||||||||*|||||||||||| targets:286   CCCCUUUGUGUCCCGUCUCGCGCC   309 Target Full Sequence	1.5	Zea mays clone EL01N0525E01.c mRNA sequence	NA	coding protein	psRNATarget
XM_020541001.1	ncRNA:24   AGGGAAACACAAGGCAGAGCGCGG   1   *|||||||||*||||||||||||| targets:6064   CCCCUUUGUGCUCCGUCUCGCGCC   6087 Target Full Sequence	1.0	PREDICTED: Zea mays plasma membrane ATPase 2-like (LOC103632998), transcript variant X36, mRNA	NA	coding protein	psRNATarget
LQ241611.1	ncRNA:24   AGGGAAACACAAGGCAGAGCGCGG   1   ||||*|||||||||*||||||||| targets:38   UCCCCUUGUGUUCCAUCUCGCGCC   61 Target Full Sequence	1.5	Sequence 7606 from Patent EP2985353	NA	coding protein	psRNATarget
JB169942.1	ncRNA:24   AGGGAAACACAAGGCAGAGCGCGG   1   ||||*|||||||||*||||||||| targets:38   UCCCCUUGUGUUCCAUCUCGCGCC   61 Target Full Sequence	1.5	Sequence 7606 from Patent EP2559767	NA	coding protein	psRNATarget
HI409481.1	ncRNA:24   AGGGAAACACAAGGCAGAGCGCGG   1   ||||*|||||||||*||||||||| targets:38   UCCCCUUGUGUUCCAUCUCGCGCC   61 Target Full Sequence	1.5	Sequence 7606 from Patent EP2074227	NA	coding protein	psRNATarget
XM_008654039.1	ncRNA:24   AGGGAAACACAAGGCAGAGCGCGG   1   ||||*|||||||||*||||||||= targets:1391   UCCCCUUGUGUUCCAUCUCGCGCU   1414 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103632220 (LOC103632220), mRNA	NA	coding protein	psRNATarget
XM_008654039.1	ncRNA:24   AGGGAAACACAAGGCAGAGCGCGG   1   *|||*|||||||||*||||||||| targets:1178   CCCCCUUGUGUUCCAUCUCGCGCC   1201 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103632220 (LOC103632220), mRNA	NA	coding protein	psRNATarget
EU952221.1	ncRNA:24   AGGGAAACACAAGGCAGAGCGCGG   1   ||||*|||||||||*||||||||= targets:1397   UCCCCUUGUGUUCCAUCUCGCGCU   1420 Target Full Sequence	2.5	Zea mays clone 1229283 mRNA sequence	NA	coding protein	psRNATarget