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BaseInfo

ncRNA ID novel_zma_miR15047
Species Zea mays
Class miRNA
Genome position Chr2:205114094-205114152 [-]
Reference genome RefGen_v4
Source SRR2089706
Length 21
Mature sequence(if miRNA) 1 - AUGAGCCCGAGCCGAGCCUGU - 21
Stem-loop(if miRNA) A    -         -A    GA   -  U
 GCAG CUCGGCUCG  CUCG  CUG GC C
 |||| |||||||||  ||||  ||| || A
 UGUC GAGCCGAGC  GAGU  GAU CG A
-    C         CC    AA   U  C
Stem-loop sequence AGCAGCUCGGCUCGACUCGGACUGGCUCAACGCUUAGAAUGAGCCCGAGCCGAGCCUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU943325.1
ncRNA:21   UGUCCGAGCCGAGCCCGAGUA   1
  *=|||||||||||||||||=|
targets:2362   UUAGGCUCGGCUCGGGCUCGU   2382

1.5 Zea mays clone 1599709 mRNA sequence NA coding protein psRNATarget