ncRNA ID | novel_zma_miR15044 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:236037527-236037583 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089706 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GCGAGGAUGUCGAGCGGUCGCUGU - 24 |
Stem-loop(if miRNA) |
----  G  G  GU         G           GC AG AU  CGAGCGGUC CUGUGGU     || || ||  ||||||||| ||||||U     CG UC UG  GUUCGCCAG GACACCU CGAG  -  A  UG         -       |
Stem-loop sequence | GCGAGGAUGUCGAGCGGUCGCUGUGGUUUCCACAGGACCGCUUGGUGUACUGCGAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001152770.1 |
|
3.0 | Zea mays phospholipase D family protein (LOC100279815), mRNA | NA | coding protein | psRNATarget | |||||||||
BT054937.1 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFc0072I07 mRNA, complete cds | NA | coding protein | psRNATarget |