Search result

BaseInfo

ncRNA ID novel_zma_miR15044
Species Zea mays
Class miRNA
Genome position Chr2:236037527-236037583 [+]
Reference genome RefGen_v4
Source SRR2089706
Length 24
Mature sequence(if miRNA) 1 - GCGAGGAUGUCGAGCGGUCGCUGU - 24
Stem-loop(if miRNA) ----  G  G  GU         G      
    GC AG AU  CGAGCGGUC CUGUGGU
    || || ||  ||||||||| ||||||U
    CG UC UG  GUUCGCCAG GACACCU
CGAG  -  A  UG         -      
Stem-loop sequence GCGAGGAUGUCGAGCGGUCGCUGUGGUUUCCACAGGACCGCUUGGUGUACUGCGAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001152770.1
ncRNA:24   UGUCGCUGGCGAGCUGUAGGAGCG   1
  **||||==|||||||||||||||*
targets:439   CGAGCGGUCGCUCGACAUCCUCGA   462

3.0 Zea mays phospholipase D family protein (LOC100279815), mRNA NA coding protein psRNATarget
BT054937.1
ncRNA:24   UGUCGCUGGCGAGCUGUAGGAGCG   1
  **||||==|||||||||||||||*
targets:439   CGAGCGGUCGCUCGACAUCCUCGA   462

3.0 Zea mays full-length cDNA clone ZM_BFc0072I07 mRNA, complete cds NA coding protein psRNATarget