Search result

BaseInfo

ncRNA ID novel_zma_miR15037
Species Zea mays
Class miRNA
Genome position Chr1:89698412-89698478 [+]
Reference genome RefGen_v4
Source SRR2089706;SRR2089708
Length 24
Mature sequence(if miRNA) 44 - CGGUUUAAGGCUUAUUUCCGUCGG - 67
Stem-loop(if miRNA) --                         C    U
  GACGGGAAUAAGCCUUAAACCGACG GAAU A
  ||||||||||||||||||||||||| |||| C
  CUGCCUUUAUUCGGAAUUUGGCUGC CUUA U
GG                         C    U
Stem-loop sequence GACGGGAAUAAGCCUUAAACCGACGCGAAUUACUUAUUCCCGUCGGUUUAAGGCUUAUUUCCGUCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB169151.1
ncRNA:24   GGCUGCCUUUAUUCGGAAUUUGGC   1
  |||||||=||||||||*|||||||
targets:16   CCGACGGGAAUAAGCCCUAAACCG   39

2.5 Sequence 6815 from Patent EP2559767 NA coding protein psRNATarget
LQ240820.1
ncRNA:24   GGCUGCCUUUAUUCGGAAUUUGGC   1
  |||||||=||||||||*|||||||
targets:16   CCGACGGGAAUAAGCCCUAAACCG   39

2.5 Sequence 6815 from Patent EP2985353 NA coding protein psRNATarget
HI408690.1
ncRNA:24   GGCUGCCUUUAUUCGGAAUUUGGC   1
  |||||||=||||||||*|||||||
targets:16   CCGACGGGAAUAAGCCCUAAACCG   39

2.5 Sequence 6815 from Patent EP2074227 NA coding protein psRNATarget
JB163388.1
ncRNA:24   GGCUGCCUUUAUUCGGAAUUUGGC   1
  |||*||||*||||||||*||||||
targets:13   CCGUCGGACAUAAGCCUCAAACCG   36

2.5 Sequence 1052 from Patent EP2559767 NA coding protein psRNATarget
LQ235057.1
ncRNA:24   GGCUGCCUUUAUUCGGAAUUUGGC   1
  |||*||||*||||||||*||||||
targets:13   CCGUCGGACAUAAGCCUCAAACCG   36

2.5 Sequence 1052 from Patent EP2985353 NA coding protein psRNATarget
HI402927.1
ncRNA:24   GGCUGCCUUUAUUCGGAAUUUGGC   1
  |||*||||*||||||||*||||||
targets:13   CCGUCGGACAUAAGCCUCAAACCG   36

2.5 Sequence 1052 from Patent EP2074227 NA coding protein psRNATarget
XM_008652299.2
ncRNA:24   GGCUGCCUUUAUUCGGAAUUUGGC   1
  |||*||*||||||||||||*||||
targets:1078   CCGUCGAAAAUAAGCCUUACACCG   1101

2.5 PREDICTED: Zea mays putative bZIP transcription factor superfamily protein (LOC103631376), mRNA NA coding protein psRNATarget