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BaseInfo

ncRNA ID novel_zma_miR15035
Species Zea mays
Class miRNA
Genome position Chr1:17092783-17092867 [-]
Reference genome RefGen_v4
Source SRR2089706
Length 22
Mature sequence(if miRNA) 1 - CUUUGACCAAGCUGAUCACCCC - 22
Stem-loop(if miRNA) --  A    U   C   -        -C   -------     C  A
  GG GGUC GCU GGU GAAGGUGG  GGC       GCCAG CU C
  || |||| ||| ||| ||||||||  |||       ||||| ||
  CC CUAG CGA CCA UUUCCACU  CCG       UGGUC GA C
CC  A    U   A   G        AC   AACAGCC     A  U
Stem-loop sequence GGAGGUCUGCUCGGUGAAGGUGGCGGCGCCAGCCUACCUAGACUGGUCCGACAAGCCCAUCACCUUUGACCAAGCUGAUCACCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008664734.2
ncRNA:22   CCCCACUAGUCGAACCAGUUUC   1
  |*|||||*=|||||||||||||
targets:3752   GUGGUGACUAGCUUGGUCAAAG   3773

2.0 PREDICTED: Zea mays uncharacterized LOC103641379 (LOC103641379), mRNA NA coding protein psRNATarget
XM_008647341.2
ncRNA:22   CCCCACUAGUCGAACCAGUUUC   1
  ****|*||||||||||||||||
targets:623   UAAAUAAUCAGCUUGGUCAAAG   644

2.0 PREDICTED: Zea mays putative MYB DNA-binding domain superfamily protein (MYB167), transcript variant X1, mRNA NA coding protein psRNATarget