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BaseInfo

ncRNA ID novel_zma_miR15033
Species Zea mays
Class miRNA
Genome position Chr1:50953270-50953341 [-]
Reference genome RefGen_v4
Source SRR2089706
Length 22
Mature sequence(if miRNA) 1 - CAGCGCGCGGCCUGAAGCGGAG - 22
Stem-loop(if miRNA) --G    G     GA       CAAGAACG GG  GA U
   UGUU UAGGC  CGCGUGC        U  AG  C U
   |||| |||||  |||||||        |  ||  |
   GCGA GUCCG  GCGCGCG        G  UC  G C
GAG    A     --       ----ACAA UU  GA G
Stem-loop sequence GUGUUGUAGGCGACGCGUGCCAAGAACGUGGAGGACUUCGGAGCUUUGAACAGCGCGCGGCCUGAAGCGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU947689.1
ncRNA:22   GAGGCGAAGUCCGGCGCGCGAC   1
  ***||||*||||||||||||*|
targets:393   ACGCGCUCCAGGCCGCGCGCCG   414

2.5 Zea mays clone 352767 mRNA sequence NA coding protein psRNATarget