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BaseInfo

ncRNA ID	novel_zma_miR15018
Species	Zea mays
Class	miRNA
Genome position	Chr1:299121278-299121399 [-]
Reference genome	RefGen_v4
Source	SRR2089706
Length	24
Mature sequence(if miRNA)	99 - UGGCAAGUCCUAGGGGGUCGGCGC - 122
Stem-loop(if miRNA)	--                     C              C         CCUU       AGG   UGGCAAGUCCUAGGGGGUCGG GCCAUAGAUCUUGG GCCGGCCCC    GACGGCG   U   ||||||||||||||||||||| |||||||||||||| |||||||||    |||||||   ACCGUUCAGGGUCCCUCAGCC CGGUAUCUAGAACC CGGCUGGGG    CUGUCGC   C AC                     A              U         --AC       GGC
Stem-loop sequence	UGGCAAGUCCUAGGGGGUCGGCGCCAUAGAUCUUGGCGCCGGCCCCCCUUGACGGCGAGGUCCGGCGCUGUCCAGGGGUCGGCUCCAAGAUCUAUGGCACCGACUCCCUGGGACUUGCCACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ239316.1	ncRNA:24   CGCGGCUGGGGGAUCCUGAACGGU   1   |||||||||||||||||||||||| targets:39   GCGCCGACCCCCUAGGACUUGCCA   62 Target Full Sequence	0.0	Sequence 5311 from Patent EP2985353	NA	coding protein	psRNATarget
JB167647.1	ncRNA:24   CGCGGCUGGGGGAUCCUGAACGGU   1   |||||||||||||||||||||||| targets:39   GCGCCGACCCCCUAGGACUUGCCA   62 Target Full Sequence	0.0	Sequence 5311 from Patent EP2559767	NA	coding protein	psRNATarget
HI407186.1	ncRNA:24   CGCGGCUGGGGGAUCCUGAACGGU   1   |||||||||||||||||||||||| targets:39   GCGCCGACCCCCUAGGACUUGCCA   62 Target Full Sequence	0.0	Sequence 5311 from Patent EP2074227	NA	coding protein	psRNATarget
NM_001149941.1	ncRNA:24   CGCGGCUGGGGGAUCCUGAACGGU   1   *=||=|||||=||=|||||||||| targets:1539   AUGCUGACCCUCUGGGACUUGCCA   1562 Target Full Sequence	2.5	Zea mays Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein (LOC100276060), mRNA	NA	coding protein	psRNATarget
EU959730.1	ncRNA:24   CGCGGCUGGGGGAUCCUGAACGGU   1   *=||=|||||=||=|||||||||| targets:1539   AUGCUGACCCUCUGGGACUUGCCA   1562 Target Full Sequence	2.5	Zea mays clone 219696 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget