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BaseInfo

ncRNA ID	novel_zma_miR15012
Species	Zea mays
Class	miRNA
Genome position	Chr9:1888514-1888580 [-]
Reference genome	RefGen_v4
Source	SRR2089706
Length	21
Mature sequence(if miRNA)	47 - UUCGGAAUUGAAGGGGAUUGG - 67
Stem-loop(if miRNA)	--     A    A         G  A      UA   UUCGG AUUG AGGGGAUUG AG GGAAAU  G   ||||| |||| ||||||||| || ||||||   AAGCC UAAC UCCCCUAAC UC CCUUUA  U GG     C    C         -  A      CU
Stem-loop sequence	UUCGGAAUUGAAGGGGAUUGGAGAGGAAAUUAGUUCAUUUCCACUCAAUCCCCUCCAAUCCCGAAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ069159.1	ncRNA:21   GGUUAGGGGAAGUUAAGGCUU   1   |||||||||||||||*||||| targets:64   CCAAUCCCCUUCAAUCCCGAA   84 Target Full Sequence	1.5	TSA: Zea mays contig04794, mRNA sequence	NA	coding protein	psRNATarget
EZ111591.1	ncRNA:21   GGUUAGGGGAAGUUAAGGCUU   1   ||*|||||||||||||||||| targets:80   CCCAUCCCCUUCAAUUCCGAA   100 Target Full Sequence	1.0	TSA: Zea mays contig47252, mRNA sequence	NA	coding protein	psRNATarget
EU942844.1	ncRNA:21   GGUUAGGGGAAGUUAAGGCUU   1   =||||||=|||||||*||||| targets:201   UCAAUCCUCUUCAAUCCCGAA   221 Target Full Sequence	2.5	Zea mays clone 1540330 mRNA sequence	NA	coding protein	psRNATarget
XM_020539803.1	ncRNA:21   GGUUAGGGGAAGUUAAGGCUU   1   =||||||=||*|||||||||| targets:842   UCAAUCCUCUCCAAUUCCGAA   862 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized protein, chloroplastic-like (LOC103636217), transcript variant X2, mRNA	NA	coding protein	psRNATarget
NM_001347002.1	ncRNA:21   GGUUAGGGGAAGUUAAGGCUU   1   =||||||=||*|||||||||| targets:1152   UCAAUCCUCUCCAAUUCCGAA   1172 Target Full Sequence	2.5	Zea mays uncharacterized protein, chloroplastic-like (LOC103636217), mRNA	NA	coding protein	psRNATarget
XM_008658575.2	ncRNA:21   GGUUAGGGGAAGUUAAGGCUU   1   =||||||=||*|||||||||| targets:1164   UCAAUCCUCUCCAAUUCCGAA   1184 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized protein, chloroplastic-like (LOC103636217), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020547122.1	ncRNA:21   GGUUAGGGGAAGUUAAGGCUU   1   ==||||||||*|||||||||| targets:297   UUAAUCCCCUCCAAUUCCGAA   317 Target Full Sequence	1.5	PREDICTED: Zea mays putative leucine-rich repeat receptor-like protein kinase family protein (LOC100217020), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547119.1	ncRNA:21   GGUUAGGGGAAGUUAAGGCUU   1   ==||||||||*|||||||||| targets:405   UUAAUCCCCUCCAAUUCCGAA   425 Target Full Sequence	1.5	PREDICTED: Zea mays putative leucine-rich repeat receptor-like protein kinase family protein (LOC100217020), transcript variant X1, mRNA	NA	coding protein	psRNATarget