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BaseInfo

ncRNA ID novel_zma_miR15009
Species Zea mays
Class miRNA
Genome position Chr9:114149617-114149676 [-]
Reference genome RefGen_v4
Source SRR2089706
Length 24
Mature sequence(if miRNA) 37 - AAAAUAAGGUUAUUUUCGGCGGUC - 60
Stem-loop(if miRNA) --      --                 CACU
  AAAAUA  AGGUUAUUUUCGGCGGU    G
  ||||||  |||||||||||||||||
  UUUUAU  UCCAAUAAAAGCCGCCG    A
GC      UC                 ACAC
Stem-loop sequence AAAAUAAGGUUAUUUUCGGCGGUCACUGACACAGCCGCCGAAAAUAACCUCUUAUUUUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT085515.1
ncRNA:24   CUG-GCGGCUUUUAUUGGAAUAAAA   1
  *||-=|=||||||||||*|||||||
targets:1151   AACGUGUCGAAAAUAACAUUAUUUU   1175

2.5 Zea mays full-length cDNA clone ZM_BFc0028G11 mRNA, complete cds NA coding protein psRNATarget