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BaseInfo

ncRNA ID novel_zma_miR15006
Species Zea mays
Class miRNA
Genome position Chr9:147546237-147546322 [-]
Reference genome RefGen_v4
Source SRR2089706
Length 24
Mature sequence(if miRNA) 63 - AGGUAGGCAGAGUAGGAGAGACGC - 86
Stem-loop(if miRNA) ---A      C    U       -ACG    --AC    -    UC
    GGUAGG AGAG AGGAGAG    CGGU    AGGC AGCC  A
    |||||| |||| |||||||    ||||    |||| ||||
    UCGUUC UCUC UCCUCUC    GCCG    UCCG UCGG  G
GCUC      -    U       CCAA    GAAC    C    CA
Stem-loop sequence AGGUAGGCAGAGUAGGAGAGACGCGGUACAGGCAGCCUCAGACGGCUCGCCUCAAGGCCGAACCCUCUCCUUCUCUCUUGCUCUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084219.2
ncRNA:24   CGCAGAGAGGAUGAGACGGAUGGA   1
  ||||||||||*|||||||||=|||
targets:122   GCGUCUCUCCCACUCUGCCUGCCU   145

2.5 Zea mays full-length cDNA clone ZM_BFb0090F13 mRNA, complete cds NA coding protein psRNATarget
EU952154.1
ncRNA:24   CGCAGAGAGGAUGAGACGGAUGGA   1
  ||||||||||*|||||||||=|||
targets:741   GCGUCUCUCCAACUCUGCCUGCCU   764

2.5 Zea mays clone 1213567 hypothetical protein mRNA, complete cds NA coding protein psRNATarget