ncRNA ID | novel_zma_miR15005 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:33592250-33592446 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089706 |
Length | 24 |
Mature sequence(if miRNA) | 174 - GUUAUUUAAUUCCCGUCGGCCCGC - 197 |
Stem-loop(if miRNA) |
--                 U               G CGG UG G  G     AG   AAC   AG         UG  G  UG G        AA      GGGCCGACGGGAAUUAG UAACUCCCGUCGGCU G   C  G CC ACGGG  UUA   UAA  CCCGUCGGC  GU GC  G CCGACGGG  UUAA   ||||||||||||||||| ||||||||||||||| |   |  | || |||||  |||   |||  |||||||||  || ||  | ||||||||  |||A   CCCGGCUGCCCUUAAUU AUUGAGGGCAGCCGA U   G  C GG UGCCC  AAU   AUU  GGGCAGCCG  CG CG  C GGCUGCCC  AAUA CG                 U               G UAA GU -  G     GA   AAA   GA         GU  G  GU -        GA    |
Stem-loop sequence | GGGCCGACGGGAAUUAGUUAACUCCCGUCGGCUGGCGGCUGGGCCGACGGGAGUUAAACUAAAGCCCGUCGGCUGGUGGCUGGGCCGACGGGAAUUAAAAUAAAGCCCGUCGGCUGGCGGCUGGCCGACGGGAGUUAAAAUAAAGCCCGUGGGCUGGAAUUGAGCCGACGGGAGUUAUUUAAUUCCCGUCGGCCCGC |