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BaseInfo

ncRNA ID novel_zma_miR15003
Species Zea mays
Class miRNA
Genome position Chr8:146097188-146097237 [-]
Reference genome RefGen_v4
Source SRR2089706
Length 21
Mature sequence(if miRNA) 30 - UGUUAUUUUCACUGACGGUUU - 50
Stem-loop(if miRNA) --           C  A   U  UU
  UGUUAUUUUCA UG CGG UU  A
  ||||||||||| || ||| ||
  ACAGUAAAAGU GC GCC AA  A
UU           A  C   C  UA
Stem-loop sequence UGUUAUUUUCACUGACGGUUUUUAAAUAACCCGCCGAUGAAAAUGACAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ107356.1
ncRNA:21   UUUGGCAGUCACUUUUAUUGU   1
  **||=|||||||*||||||||
targets:72   CCACUGUCAGUGUAAAUAACA   92

2.5 TSA: Zea mays contig43014, mRNA sequence NA coding protein psRNATarget