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BaseInfo

ncRNA ID	novel_zma_miR15000
Species	Zea mays
Class	miRNA
Genome position	Chr8:152337406-152337545 [+]
Reference genome	RefGen_v4
Source	SRR2089706
Length	21
Mature sequence(if miRNA)	1 - AUUAUGGUGGAAGGGUAGGAG - 21
Stem-loop(if miRNA)	--                     A           C    GA C          G    A       ACA   AUUAUGGUGGAAGGGUAGGAG GUAAAAUAUCA UUUG  A CACAAAUAAG UGAA UAAGCUA   U   ||||||||||||||||||||| ||||||||||| ||||  | |||||||||| |||| |||||||   UAAUACCACUUUCUCAUCCUC CAUUUUAUGGU AAAC  U GUGUUUAUUC ACUU AUUCGAU   U CC                     C           A    UC A          G    A       GUG
Stem-loop sequence	AUUAUGGUGGAAGGGUAGGAGAGUAAAAUAUCACUUUGGAACCACAAAUAAGGUGAAAUAAGCUAACAUUGUGUAGCUUAAUUCAGCUUAUUUGUGAUCUCAAAAUGGUAUUUUACCCUCCUACUCUUUCACCAUAAUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT087535.1	ncRNA:21   GAGGAUGGGAAGGUGGUAUUA   1   |||||==|||||||||||||| targets:190   CUCCUGUCCUUCCACCAUAAU   210 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0104B17 mRNA, complete cds	NA	coding protein	psRNATarget
BT036602.1	ncRNA:21   GAGGAUGGGAAGGUGGUAUUA   1   ||=||||||||*||||||||| targets:1067   CUUCUACCCUUACACCAUAAU   1087 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0125H01 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001139196.1	ncRNA:21   GAGGAUGGGAAGGUGGUAUUA   1   ||=||||||||*||||||||| targets:1067   CUUCUACCCUUACACCAUAAU   1087 Target Full Sequence	2.5	Zea mays OSJNBa0029H02.27-like protein (pco137821), mRNA	NA	coding protein	psRNATarget