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BaseInfo

ncRNA ID osa-miRf11097-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - GGGAUAAUCGAUUAUCCCGUGC - NA
Stem-loop(if miRNA)             A   A         --A      UG
GACCGCACGGGA AAU GAUUAUCCC   UGCGGU  G
|||||||||||| ||| |||||||||   ||||||  C
CUGGCGUGCCCU UUA CUAAUAGGG   ACGUUA  C
            A   G         GAC      UU
Stem-loop sequence GACCGCACGGGAAAAUAGAUUAUCCCAUGCGGUUGGCCUUAUUGCACAGGGGAUAAUCGAUUAUCCCGUGCGGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK063216.1
ncRNA:22   CGU-GCCCUAUUAGCUAAUAGGG   1
  |||-|||||||||||||||||||
targets:680   GCAUCGGGAUAAUCGAUUAUCCC   702

2.0 Oryza sativa Japonica Group cDNA clone:001-112-D12, full insert sequence NA coding protein psRNATarget
CT835270.1
ncRNA:22   CGUGCCCUAUUAGCUAAUAGGG   1
  |=|||||||||||||||||||*
targets:563   GUACGGGAUAAUCGAUUAUCCA   584

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN063B09, full insert sequence NA coding protein psRNATarget
AK062334.1
ncRNA:22   CGUGCCCUAUUAGCUAAUAGGG   1
  ||||*|||||||||||||||||
targets:559   GCACAGGAUAAUCGAUUAUCCC   580

1.0 Oryza sativa Japonica Group cDNA clone:001-101-E02, full insert sequence NA coding protein psRNATarget
CT829388.1
ncRNA:22   CGUGCCCUAUUAGCUAAUAGGG   1
  ||||*|||||||||||||||||
targets:667   GCACAGGAUAAUCGAUUAUCCC   688

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA016C04, full insert sequence NA coding protein psRNATarget
AK068539.1
ncRNA:22   CGUGCCCUAUUAGCUAAUAGGG   1
  ||||*|||||||||||||||||
targets:563   GCACAGGAUAAUCGAUUAUCCC   584

1.0 Oryza sativa Japonica Group cDNA clone:J013151E13, full insert sequence NA coding protein psRNATarget
XM_015773199.1
ncRNA:22   CGUGCCCUAUUAGCUAAUAGGG   1
  ||||*|||||||||||||||||
targets:700   GCACAGGAUAAUCGAUUAUCCC   721

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4333700 (LOC4333700), mRNA uncharacterized LOC4333700(LOC4333700) coding protein psRNATarget