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BaseInfo

ncRNA ID	novel_zma_miR14999
Species	Zea mays
Class	miRNA
Genome position	Chr8:151912953-151913051 [+]
Reference genome	RefGen_v4
Source	SRR2089706
Length	24
Mature sequence(if miRNA)	76 - AAAACAUCAGUUUCAACGGUCGUC - 99
Stem-loop(if miRNA)	--                  C             U   CUACAUAAAUA   CGACCGUUGAAACUGGUG UUUAAGUAUAGUA AGA           U   |||||||||||||||||| ||||||||||||| |||           U   GCUGGCAACUUUGACUAC AAAUUCAUAUCAU UCU           A CU                  A             C   ACUAUCAUCAU
Stem-loop sequence	CGACCGUUGAAACUGGUGCUUUAAGUAUAGUAUAGACUACAUAAAUAUUAUACUACUAUCAUCUCUACUAUACUUAAAACAUCAGUUUCAACGGUCGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020547954.1	ncRNA:24   CUGCUGGCAACUUUGACUACAAAA   1   |||||||||||||||||||||||| targets:665   GACGACCGUUGAAACUGAUGUUUU   688 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100273810 (LOC100273810), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547953.1	ncRNA:24   CUGCUGGCAACUUUGACUACAAAA   1   |||||||||||||||||||||||| targets:665   GACGACCGUUGAAACUGAUGUUUU   688 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100273810 (LOC100273810), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU949327.1	ncRNA:24   CUGCUGGCAACUUUGACUACAAAA   1   *||||=||||||||||||||*||| targets:215   AACGAUCGUUGAAACUGAUGCUUU   238 Target Full Sequence	2.5	Zea mays clone 401177 mRNA sequence	NA	coding protein	psRNATarget
EZ076153.1	ncRNA:22   GCUGGCAACUUUGACUACAAAA   1   ||||||||||||||||||*||| targets:1   CGACCGUUGAAACUGAUGCUUU   22 Target Full Sequence	1.5	TSA: Zea mays contig11790, mRNA sequence	NA	coding protein	psRNATarget
XM_020538317.1	ncRNA:24   CUGC-------UGGCAACUUUGACUACAAAA   1   ||||-------|||*||||||||*||||||| targets:694   GACGCGGAACAACCAUUGAAACUAAUGUUUU   724 Target Full Sequence	2.5	PREDICTED: Zea mays solanesyl-diphosphate synthase 1, mitochondrial (LOC103626280), transcript variant X5, mRNA	NA	coding protein	psRNATarget