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BaseInfo

ncRNA ID	novel_zma_miR14989
Species	Zea mays
Class	miRNA
Genome position	Chr7:47966460-47966527 [-]
Reference genome	RefGen_v4
Source	SRR2089706
Length	23
Mature sequence(if miRNA)	46 - GGAAGGAUUGGAGGGGAUUGAGG - 68
Stem-loop(if miRNA)	--  A         -    A             UA   GG AGGAUUGGA GGGG UUGAGGGGGAAAU  G   || ||||||||| |||| |||||||||||||   CC UCCUAACCU CCCC AACUCCCCCUUUA  U GG  C         A    -             UU
Stem-loop sequence	GGAAGGAUUGGAGGGGAUUGAGGGGGAAAUUAGUUUAUUUCCCCCUCAACCCCAUCCAAUCCUCCCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163816.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   ||||||||||||||||||||||| targets:34   CCUCAAUCCCCUCCAAUCCUUCC   56 Target Full Sequence	0.0	Sequence 1480 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235485.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   ||||||||||||||||||||||| targets:34   CCUCAAUCCCCUCCAAUCCUUCC   56 Target Full Sequence	0.0	Sequence 1480 from Patent EP2985353	NA	coding protein	psRNATarget
HI403355.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   ||||||||||||||||||||||| targets:34   CCUCAAUCCCCUCCAAUCCUUCC   56 Target Full Sequence	0.0	Sequence 1480 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235623.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   ||||||||||||||||||||*|| targets:36   CCUCAAUCCCCUCCAAUCCUCCC   58 Target Full Sequence	1.5	Sequence 1618 from Patent EP2985353	NA	coding protein	psRNATarget
JB163954.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   ||||||||||||||||||||*|| targets:36   CCUCAAUCCCCUCCAAUCCUCCC   58 Target Full Sequence	1.5	Sequence 1618 from Patent EP2559767	NA	coding protein	psRNATarget
HI403493.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   ||||||||||||||||||||*|| targets:36   CCUCAAUCCCCUCCAAUCCUCCC   58 Target Full Sequence	1.5	Sequence 1618 from Patent EP2074227	NA	coding protein	psRNATarget
BT088155.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   =|||||||||||||||||||*|| targets:1467   UCUCAAUCCCCUCCAAUCCUCCC   1489 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0038D09 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020546009.1	ncRNA:23   GGAGUUAGGGGAGGUUAGGAAGG   1   |||=**||=|||||||||||||| targets:42   CCUUCCUCUCCUCCAAUCCUUCC   64 Target Full Sequence	3.0	PREDICTED: Zea mays homeobox-leucine zipper protein ROC7 (LOC103641332), transcript variant X2, mRNA	NA	coding protein	psRNATarget