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BaseInfo

ncRNA ID	novel_zma_miR14988
Species	Zea mays
Class	miRNA
Genome position	Chr7:49123121-49123182 [-]
Reference genome	RefGen_v4
Source	SRR2089706
Length	24
Mature sequence(if miRNA)	1 - ACCGUCCGGCUGUCAGGCAGGGAA - 24
Stem-loop(if miRNA)	--      ---   C  G     C     -   C   CCCUGC   GCA GC CGGAC GUCCG GCC U   ||||||   ||| || ||||| ||||| |||   GGGACG   UGU CG GCCUG CAGGC CGG A AA      GAC   -  -     C     G   G
Stem-loop sequence	CCCUGCGCACGCGCGGACCGUCCGGCCCUAGGGCGCGGACCGUCCGGCUGUCAGGCAGGGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU968855.1	ncRNA:24   AAGGGACGGACUGUCGGCCUGCCA   1   |||||||||||||=|||||||||| targets:757   UUCCCUGCCUGACGGCCGGACGGU   780 Target Full Sequence	1.5	Zea mays clone 324570 mRNA sequence	NA	coding protein	psRNATarget
EZ049111.1	ncRNA:24   AAGGGACGGACUGUCGGCCUGCCA   1   ||=||||||||||=|||||||||| targets:60   UUUCCUGCCUGACGGCCGGACGGU   83 Target Full Sequence	1.5	TSA: Zea mays contig50229, mRNA sequence	NA	coding protein	psRNATarget
EU970066.1	ncRNA:24   AAGGGACGGACUGUCGGCCUGCCA   1   |||=|||||||||=|||||||||| targets:964   UUCUCUGCCUGACGGCCGGACGGU   987 Target Full Sequence	1.5	Zea mays clone 339328 mRNA sequence	NA	coding protein	psRNATarget
XM_020547963.1	ncRNA:24   AAGGGACGGACUGUCGGCCUGCCA   1   ||=||||||||||=|||||||||| targets:1113   UUUCCUGCCUGACGGCCGGACGGU   1136 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC100501411), transcript variant X2, mRNA	NA	coding protein	psRNATarget
NM_001310588.1	ncRNA:24   AAGGGACGGACUGUCGGCCUGCCA   1   ||=||||||||||=|||||||||| targets:1406   UUUCCUGCCUGACGGCCGGACGGU   1429 Target Full Sequence	1.5	Zea mays uncharacterized LOC100272476 (IDP716), mRNA	NA	coding protein	psRNATarget
NM_001196134.1	ncRNA:24   AAGGGACGGACUGUCGGCCUGCCA   1   ||=||||||||||=|||||||||| targets:1538   UUUCCUGCCUGACGGCCGGACGGU   1561 Target Full Sequence	1.5	Zea mays hypothetical protein (LOC100501411), mRNA	NA	coding protein	psRNATarget
BT085255.1	ncRNA:24   AAGGGACGGACUGUCGGCCUGCCA   1   ||=||||||||||=|||||||||| targets:1538   UUUCCUGCCUGACGGCCGGACGGU   1561 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0345D14 mRNA, complete cds	NA	coding protein	psRNATarget
BT038788.1	ncRNA:24   AAGGGACGGACUGUCGGCCUGCCA   1   ||=||||||||||=|||||||||| targets:1488   UUUCCUGCCUGACGGCCGGACGGU   1511 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0325P03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175289.1	ncRNA:24   AAGGGACGGACUGUCGGCCUGCCA   1   ||=|||*||||||=|||||||||| targets:1717   UUUCCUACCUGACGGCCGGACGGU   1740 Target Full Sequence	2.5	Zea mays uncharacterized LOC100382557 (LOC100382557), mRNA	NA	coding protein	psRNATarget
BT064749.1	ncRNA:24   AAGGGACGGACUGUCGGCCUGCCA   1   ||=|||*||||||=|||||||||| targets:1717   UUUCCUACCUGACGGCCGGACGGU   1740 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0101G18 mRNA, complete cds	NA	coding protein	psRNATarget