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BaseInfo

ncRNA ID	novel_zma_miR14976
Species	Zea mays
Class	miRNA
Genome position	Chr1:181982071-181982184 [+]
Reference genome	RefGen_v4
Source	SRR2089706
Length	24
Mature sequence(if miRNA)	1 - AGGGCGGACUGUCCGCGGCCUAGG - 24
Stem-loop(if miRNA)	--A G            C G        -     G  CCG   - -CU  U     -   U    G GCGGACUGUCCG G CCUAGGGC UGGAC GU   CGG C   GG GCAGG AGC C    | |||||||||||| | |||||||| ||||| ||   ||| |   || ||||| |||    C CGCCUGGCAGGC C GGAUCCCG GCCUG CA   GCC G   UC CGUCC UUG G GUG G            - G        C     G  --A   A CAG  -     C   G
Stem-loop sequence	AGGGCGGACUGUCCGCGGCCUAGGGCUGGACGGUCCGCGGCCUGGUGCAGGAGCUCGGGUUCCCUGCCUGACGACCGAACGGUCCGCGCCCUAGGGCCGGACGGUCCGCGCGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001196968.1	ncRNA:24   GGA-UCCGGCGCCUGUCAGGCGGGA   1   |||-||||||||||||||||||||* targets:1263   CCUCAGGCCGCGGACAGUCCGCCCC   1287 Target Full Sequence	1.0	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
BT088349.1	ncRNA:24   GGA-UCCGGCGCCUGUCAGGCGGGA   1   |||-||||||||||||||||||||* targets:1263   CCUCAGGCCGCGGACAGUCCGCCCC   1287 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:24   GGAUCCGGCGCCUGUCAGGCGGGA   1   ||*||||||||||||||||||||* targets:2707   CCCAGGCCGCGGACAGUCCGCCCC   2730 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget
EZ049944.1	ncRNA:24   GGAUCCGGCGCCUGUCAGGCGGGA   1   ***=*|||||||=||||||||||* targets:286   GACGCGCCGCGGGCAGUCCGCCCG   309 Target Full Sequence	2.5	TSA: Zea mays contig51062, mRNA sequence	NA	coding protein	psRNATarget