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BaseInfo

ncRNA ID novel_zma_miR14972
Species Zea mays
Class miRNA
Genome position Chr1:14024783-14024840 [+]
Reference genome RefGen_v4
Source SRR2089706
Length 22
Mature sequence(if miRNA) 1 - UGAUCUCUACGUCGGAGGCGUC - 22
Stem-loop(if miRNA) --U  U     -   CG     G   -C  A
   GA CUCUA CGU  GAGGC UCC  CA A
   || ||||| |||  ||||| |||  ||
   CU GAGAU GUA  CUCCG AGG  GU C
GAG  -     C   AG     -   CA  U
Stem-loop sequence UGAUCUCUACGUCGGAGGCGUCCCCAAACUUGACGGAGCCUCGAAUGCUAGAGUCGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020538918.1
ncRNA:22   CUGCGGAGGCUGCAUCUCUAGU   1
  |||*||||||=|||||||||||
targets:720   GACUCCUCCGGCGUAGAGAUCA   741

2.5 PREDICTED: Zea mays uncharacterized LOC100280126 (LOC100280126), transcript variant X2, mRNA NA coding protein psRNATarget