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BaseInfo

ncRNA ID novel_zma_miR14968
Species Zea mays
Class miRNA
Genome position Chr10:110785331-110785400 [-]
Reference genome RefGen_v4
Source SRR1583943
Length 24
Mature sequence(if miRNA) 47 - ACUCGGUGAAGAAGCUCUUUGCCG - 70
Stem-loop(if miRNA) --      UG                      UUA
  ACUCGG  AAGAAGCUCUUUGCCGAGUGUU   U
  ||||||  ||||||||||||||||||||||
  UGAGCC  UUUUUUGAGAAACGGCUCACAG   U
UG      GU                      UUU
Stem-loop sequence ACUCGGUGAAGAAGCUCUUUGCCGAGUGUUUUAUUUUUGACACUCGGCAAAGAGUUUUUUUGCCGAGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ071551.1
ncRNA:24   GCCG--UUUCUCGAAGAAGUGGCUCA   1
  |*||--||=||||*||||||||||||
targets:119   CAGCCAAAGGAGCAUCUUCACCGAGU   144

2.5 TSA: Zea mays contig07188, mRNA sequence NA coding protein psRNATarget