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BaseInfo

ncRNA ID novel_zma_miR14962
Species Zea mays
Class miRNA
Genome position Chr6:146323232-146323289 [+]
Reference genome RefGen_v4
Source SRR2089706
Length 24
Mature sequence(if miRNA) 1 - CUGUCAGGCCGGUAAGUGGAGCGG - 24
Stem-loop(if miRNA) --       -     UA     -A  G - A
  CUGUCAG GCCGG  AGUGG  GC G C A
  ||||||| |||||  |||||  || | | A
  GGCGGUC CGGCU  UCACU  CG C G G
GG       U     --     GG  G A U
Stem-loop sequence CUGUCAGGCCGGUAAGUGGAGCGGCAAAGUGACGGCGGUCACUUCGGCUCUGGCGGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020541001.1
ncRNA:24   GGCGAGGUGAAUGGCCGGACUGUC   1
  ||||||||||*||||*||||||||
targets:5031   CCGCUCCACUGACCGACCUGACAG   5054

2.5 PREDICTED: Zea mays plasma membrane ATPase 2-like (LOC103632998), transcript variant X36, mRNA NA coding protein psRNATarget