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BaseInfo

ncRNA ID	novel_zma_miR14961
Species	Zea mays
Class	miRNA
Genome position	Chr4:12914054-12914233 [-]
Reference genome	RefGen_v4
Source	SRR1583942
Length	21
Mature sequence(if miRNA)	1 - CACAUCCGGACAUAGUACACU - 21
Stem-loop(if miRNA)	--      C     C                         C     A   U   C A  C               U  C  CUA     A   UGUACU UGUCC GAUGUGUGGUCACAAAAUUUAAAGC GCCCC GCU CAU U UG GCUUCUCUUCUCUUA GU GG   CUAAG U   |||||| ||||| ||||||||||||||||||||||||| ||||| ||| ||| | || ||||||||||||||| || ||   |||||   ACAUGA ACAGG CUACACACCAGUGUUUUAAAUUUCG CGGGG CGA GUA A AC CGAAGAGAAGAGAAU CA CC   GAUUC C UC      U     C                         A     C   C   C C  A               C  C  CAC     A
Stem-loop sequence	UGUACUCUGUCCCGAUGUGUGGUCACAAAAUUUAAAGCCGCCCCAGCUUCAUCUAUGCGCUUCUCUUCUCUUAUGUCGGCUACUAAGAUCACUUAGCACCCCACCUAAGAGAAGAGAAGCACACACAUGCAGCCGGGGCAGCUUUAAAUUUUGUGACCACACAUCCGGACAUAGUACACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020538582.1	ncRNA:21   UCACAUGAUACAGGCCUACAC   1   =|||||||*|||||||||||* targets:3223   GGUGUACUCUGUCCGGAUGUC   3243 Target Full Sequence	2.5	PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020538581.1	ncRNA:21   UCACAUGAUACAGGCCUACAC   1   =|||||||*|||||||||||* targets:3361   GGUGUACUCUGUCCGGAUGUC   3381 Target Full Sequence	2.5	PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU956642.1	ncRNA:21   UCACAUGAUACAGGCCUACAC   1   =||||*||||||*|||||||| targets:602   GGUGUUCUAUGUGCGGAUGUG   622 Target Full Sequence	2.5	Zea mays clone 1569052 protein kinase/ transmembrane receptor protein serine/threonine kinase mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154336.1	ncRNA:21   UCACAUGAUACAGGCCUACAC   1   =||||*||||||*|||||||| targets:602   GGUGUUCUAUGUGCGGAUGUG   622 Target Full Sequence	2.5	Zea mays protein kinase/ transmembrane receptor protein serine/threonine kinase (LOC100281418), mRNA	NA	coding protein	psRNATarget