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BaseInfo

ncRNA ID	novel_zma_miR14950
Species	Zea mays
Class	miRNA
Genome position	Chr10:108833386-108833462 [-]
Reference genome	RefGen_v4
Source	SRR1583942
Length	21
Mature sequence(if miRNA)	57 - AUCACGGGAGGAUUGGAGAGG - 77
Stem-loop(if miRNA)	--        AG    G   A               AUG   AUCACGGG  GAUU GAG GGAUUGAGGGGGGAA   A   ||||||||  |||| ||| |||||||||||||||   A   UAGUGCCC  CUAA CUC CCUAACUCCCUCUUU   C UC        --    A   C               AAU
Stem-loop sequence	AUCACGGGAGGAUUGGAGAGGAUUGAGGGGGGAAAUGAACUAAUUUCUCCCUCAAUCCCCUCAAAUCCCCGUGAUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238522.1	ncRNA:21   GGAGAGGUUAGGAGGGCACUA   1   |||||||=||||||||||||| targets:61   CCUCUCCGAUCCUCCCGUGAU   81 Target Full Sequence	1.0	Sequence 4517 from Patent EP2985353	NA	coding protein	psRNATarget
JB166853.1	ncRNA:21   GGAGAGGUUAGGAGGGCACUA   1   |||||||=||||||||||||| targets:61   CCUCUCCGAUCCUCCCGUGAU   81 Target Full Sequence	1.0	Sequence 4517 from Patent EP2559767	NA	coding protein	psRNATarget
HI406392.1	ncRNA:21   GGAGAGGUUAGGAGGGCACUA   1   |||||||=||||||||||||| targets:61   CCUCUCCGAUCCUCCCGUGAU   81 Target Full Sequence	1.0	Sequence 4517 from Patent EP2074227	NA	coding protein	psRNATarget
NM_001352049.1	ncRNA:21   GGAGAGGUUAGGAGGGCACUA   1   |||||||=||||||||||||| targets:560   CCUCUCCGAUCCUCCCGUGAU   580 Target Full Sequence	1.0	Zea mays uncharacterized LOC100284194 (pco105859), transcript variant 2, mRNA	NA	coding protein	psRNATarget
XM_020547779.1	ncRNA:21   GGAGAGGUUAGGAGGGCACUA   1   |||||||=||||||||||||| targets:588   CCUCUCCGAUCCUCCCGUGAU   608 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100284194 (pco105859), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020547780.1	ncRNA:21   GGAGAGGUUAGGAGGGCACUA   1   |||||||=||||||||||||| targets:590   CCUCUCCGAUCCUCCCGUGAU   610 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100284194 (pco105859), transcript variant X2, mRNA	NA	coding protein	psRNATarget
HI403493.1	ncRNA:21   GGAGAGGUUAGGAGGGCACUA   1   ||*|||||||||||||||||| targets:43   CCCCUCCAAUCCUCCCGUGAU   63 Target Full Sequence	1.0	Sequence 1618 from Patent EP2074227	NA	coding protein	psRNATarget
JB163954.1	ncRNA:21   GGAGAGGUUAGGAGGGCACUA   1   ||*|||||||||||||||||| targets:43   CCCCUCCAAUCCUCCCGUGAU   63 Target Full Sequence	1.0	Sequence 1618 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235623.1	ncRNA:21   GGAGAGGUUAGGAGGGCACUA   1   ||*|||||||||||||||||| targets:43   CCCCUCCAAUCCUCCCGUGAU   63 Target Full Sequence	1.0	Sequence 1618 from Patent EP2985353	NA	coding protein	psRNATarget
JB163816.1	ncRNA:21   GGAGAGGUUAGGAGGGCACUA   1   ||*||||||||||=||||||| targets:41   CCCCUCCAAUCCUUCCGUGAU   61 Target Full Sequence	2.5	Sequence 1480 from Patent EP2559767	NA	coding protein	psRNATarget
HI403355.1	ncRNA:21   GGAGAGGUUAGGAGGGCACUA   1   ||*||||||||||=||||||| targets:41   CCCCUCCAAUCCUUCCGUGAU   61 Target Full Sequence	2.5	Sequence 1480 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235485.1	ncRNA:21   GGAGAGGUUAGGAGGGCACUA   1   ||*||||||||||=||||||| targets:41   CCCCUCCAAUCCUUCCGUGAU   61 Target Full Sequence	2.5	Sequence 1480 from Patent EP2985353	NA	coding protein	psRNATarget