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BaseInfo

ncRNA ID novel_zma_miR14930
Species Zea mays
Class miRNA
Genome position Chr4:1827887-1827952 [-]
Reference genome RefGen_v4
Source SRR2089706;SRR2089707
Length 24
Mature sequence(if miRNA) 1 - UCGGUAAAGUUAGGAUCUCGGCAA - 24
Stem-loop(if miRNA) --      U   G  UU               UU
  GCCGAG GUU UA  CUUUGCCGAGUGUUU  U
  |||||| ||| ||  |||||||||||||||
  CGGCUC UAG AU  GAAAUGGCUCACGGG  G
AA      -   G  -U               CU
Stem-loop sequence GCCGAGUGUUGUAUUCUUUGCCGAGUGUUUUUUGUCGGGCACUCGGUAAAGUUAGGAUCUCGGCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB166323.1
ncRNA:24   AACGGCUCUAGGAUUGAAAUGGCU   1
  |||||||||||||||||||=||||
targets:153   UUGCCGAGAUCCUAACUUUGCCGA   176

1.5 Sequence 3987 from Patent EP2559767 NA coding protein psRNATarget
LQ237992.1
ncRNA:24   AACGGCUCUAGGAUUGAAAUGGCU   1
  |||||||||||||||||||=||||
targets:153   UUGCCGAGAUCCUAACUUUGCCGA   176

1.5 Sequence 3987 from Patent EP2985353 NA coding protein psRNATarget
HI405862.1
ncRNA:24   AACGGCUCUAGGAUUGAAAUGGCU   1
  |||||||||||||||||||=||||
targets:153   UUGCCGAGAUCCUAACUUUGCCGA   176

1.5 Sequence 3987 from Patent EP2074227 NA coding protein psRNATarget
AF439722.1
ncRNA:24   AACGGCUCUAGGAUUGAAAUGGCU   1
  ***||*|||||||||||*||||||
targets:426   AAUCCCAGAUCCUAACUCUACCGA   449

2.5 Zea mays S-adenosyl-L-homocysteine hydrolase mRNA, partial cds NA coding protein psRNATarget