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BaseInfo

ncRNA ID	ath-miRf10157-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - CUACUCGACCAGGGGGUCGAGUGAU - NA
Stem-loop(if miRNA)	-           G         ----     G UGA AGA CACUCGACCUC UGGUCGAGU    GAUGU G   A ||| ||||||||||| |||||||||    ||||| | UCU GUGAGCUGGGG ACCAGCUCA    CUGUA U   G    A           G         UCUC     G GAU
Stem-loop sequence	AGACACUCGACCUCGUGGUCGAGUGAUGUGGUGAAGUAGUGAUGUCCUCUACUCGACCAGGGGGUCGAGUGAUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183042.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   ||||||||||||||||||||||||| targets:1570   AUCACUCGACCCCCUGGUCGAGUAG   1594 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   |*||||||||||||||||||||||| targets:89   ACCACUCGACCCCCUGGUCGAGUAG   113 Target Full Sequence	0.0	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   |*||||||||||||||||||||||| targets:123   ACCACUCGACCCCCUGGUCGAGUAG   147 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   |*||||||||||||||||||||||| targets:498   ACCACUCGACCCCCUGGUCGAGUAG   522 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   |*||||||||||||||||||||||| targets:498   ACCACUCGACCCCCUGGUCGAGUAG   522 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   ||=||*||||||||||||||||||* targets:582   AUUACYCGACCCCCUGGUCGAGUAU   606 Target Full Sequence	1.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BT014714.1	ncRNA:25   UAG-UGAGCUGGGGGACCAGCUCAUC   1   |||-|||||||||||||||||||||* targets:179   AUCUACUCGACCCCCUGGUCGAGUAU   204 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   =*||||||||||||||||||||||* targets:229   GCCACUCGACCCCCUGGUCGAGUAU   253 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:25   UAG-UGAGCUGGGGGACCAGCUCAUC   1   |||-|||||||||||||||||||||* targets:179   AUCUACUCGACCCCCUGGUCGAGUAU   204 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   =*||||||||||||||||||||||* targets:229   GCCACUCGACCCCCUGGUCGAGUAU   253 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   *|=|||||||||||||||||||||* targets:307   CUUACUCGACCCCCUGGUCGAGUAU   331 Target Full Sequence	1.0	Arabidopsis thaliana	NA	coding protein	psRNATarget
AY231407.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   |*|||||||||||*||||||||||| targets:488   ACCACUCGACCCCGUGGUCGAGUAG   512 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   |*||||||||||||*|||||||||| targets:1103   ACCACUCGACCCCCAGGUCGAGUAG   1127 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT014714.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   =|=||||*||||||||||||||||* targets:300   GUUACUCAACCCCCUGGUCGAGUAU   324 Target Full Sequence	2.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   =|=||||*||||||||||||||||* targets:300   GUUACUCAACCCCCUGGUCGAGUAU   324 Target Full Sequence	2.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   |*||*||*|||||*||||||||||| targets:168   ACCAGUCAACCCCGUGGUCGAGUAG   192 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   |*||*||*|||||*||||||||||| targets:543   ACCAGUCAACCCCGUGGUCGAGUAG   567 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   |*||*||*|||||*||||||||||| targets:543   ACCAGUCAACCCCGUGGUCGAGUAG   567 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   |*|||||||||||*||||||||||* targets:534   ACCACUCGACCCCAUGGUCGAGUAC   558 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BT025674.1	ncRNA:25   UAG-UGAGCUGGGGGACCAGCUCAUC   1   |||-|||||||||||*|||||||||* targets:185   AUCUACUCGACCCCCAGGUCGAGUAA   210 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
EF183194.1	ncRNA:25   UAGUGAGCUGGGGGACCAGCUCAUC   1   |*|||||||||*||*|||||||||| targets:448   ACCACUCGACCACCAGGUCGAGUAG   472 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget