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BaseInfo

ncRNA ID	novel_zma_miR14923
Species	Zea mays
Class	miRNA
Genome position	Chr4:197750538-197750599 [-]
Reference genome	RefGen_v4
Source	SRR2089706;SRR2089708
Length	24
Mature sequence(if miRNA)	39 - AGGAUUGGAGGGAAUUGAGGGGGA - 62
Stem-loop(if miRNA)	--            A              AA   AGGAUUGGAGGG AUUGAGGGGGAAAU  A   |||||||||||| ||||||||||||||   UCCUAAUCUCUC UAAUUCCCCCUUUA  C UC            C              AU
Stem-loop sequence	AGGAUUGGAGGGAAUUGAGGGGGAAAUAAACUAAUUUCCCCCUUAAUCCUCUCUAAUCCUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020540504.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   |||=||||||||||||||=||||| targets:1847   UCCUCCUCAAUUCCCUCCGAUCCU   1870 Target Full Sequence	1.5	PREDICTED: Zea mays nucleolar RNA helicase 2 (LOC100281387), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020540503.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   |||=||||||||||||||=||||| targets:2285   UCCUCCUCAAUUCCCUCCGAUCCU   2308 Target Full Sequence	1.5	PREDICTED: Zea mays nucleolar RNA helicase 2 (LOC100281387), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI403493.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   |||||||||||*|||||||||||| targets:32   UCCCCCUCAAUCCCCUCCAAUCCU   55 Target Full Sequence	1.5	Sequence 1618 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235623.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   |||||||||||*|||||||||||| targets:32   UCCCCCUCAAUCCCCUCCAAUCCU   55 Target Full Sequence	1.5	Sequence 1618 from Patent EP2985353	NA	coding protein	psRNATarget
JB163954.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   |||||||||||*|||||||||||| targets:32   UCCCCCUCAAUCCCCUCCAAUCCU   55 Target Full Sequence	1.5	Sequence 1618 from Patent EP2559767	NA	coding protein	psRNATarget
HI403355.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   |=|=|||||||*|||||||||||| targets:30   UUCUCCUCAAUCCCCUCCAAUCCU   53 Target Full Sequence	1.5	Sequence 1480 from Patent EP2074227	NA	coding protein	psRNATarget
JB163816.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   |=|=|||||||*|||||||||||| targets:30   UUCUCCUCAAUCCCCUCCAAUCCU   53 Target Full Sequence	1.5	Sequence 1480 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235485.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   |=|=|||||||*|||||||||||| targets:30   UUCUCCUCAAUCCCCUCCAAUCCU   53 Target Full Sequence	1.5	Sequence 1480 from Patent EP2985353	NA	coding protein	psRNATarget
BT088155.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   ||=|=||||||*|||||||||||| targets:1463   UCUCUCUCAAUCCCCUCCAAUCCU   1486 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0038D09 mRNA, complete cds	NA	coding protein	psRNATarget
EZ098881.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   |==||||=|||*|||||||||||| targets:77   UUUCCCUUAAUCCCCUCCAAUCCU   100 Target Full Sequence	2.5	TSA: Zea mays contig34536, mRNA sequence	NA	coding protein	psRNATarget
EZ055746.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   |=|*|||||||*|||||||||||| targets:75   UUCACCUCAAUCCCCUCCAAUCCU   98 Target Full Sequence	1.5	TSA: Zea mays contig56868, mRNA sequence	NA	coding protein	psRNATarget
AY110351.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   |=|*|||||||*|||||||||||| targets:41   UUCACCUCAAUCCCCUCCAAUCCU   64 Target Full Sequence	1.5	Zea mays CL33021_1 mRNA sequence	NA	coding protein	psRNATarget
EU950950.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   *|||*|||||||||=||||||||* targets:565   ACCCACUCAAUUCCUUCCAAUCCA   588 Target Full Sequence	2.5	Zea mays clone 676962 mRNA sequence	NA	coding protein	psRNATarget
NM_001155652.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   *|||*|||||||||=||||||||* targets:1302   ACCCACUCAAUUCCUUCCAAUCCA   1325 Target Full Sequence	2.5	Zea mays mitochondrial uncoupling protein 2 (LOC100282746), mRNA	NA	coding protein	psRNATarget
EU962164.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   *|||*|||||||||=||||||||* targets:1302   ACCCACUCAAUUCCUUCCAAUCCA   1325 Target Full Sequence	2.5	Zea mays clone 240681 mitochondrial uncoupling protein 2 mRNA, complete cds; nuclear gene for mitochondrial product	NA	coding protein	psRNATarget
XM_008669767.2	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   *|||*|||||||||=||||||||* targets:1385   ACCCACUCAAUUCCUUCCAAUCCA   1408 Target Full Sequence	2.5	PREDICTED: Zea mays mitochondrial uncoupling protein 2 (LOC100282746), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI403290.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   ||=|*||||||*|||||||||||* targets:70   UCUCACUCAAUCCCCUCCAAUCCC   93 Target Full Sequence	2.5	Sequence 1415 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235420.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   ||=|*||||||*|||||||||||* targets:70   UCUCACUCAAUCCCCUCCAAUCCC   93 Target Full Sequence	2.5	Sequence 1415 from Patent EP2985353	NA	coding protein	psRNATarget
JB163751.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   ||=|*||||||*|||||||||||* targets:70   UCUCACUCAAUCCCCUCCAAUCCC   93 Target Full Sequence	2.5	Sequence 1415 from Patent EP2559767	NA	coding protein	psRNATarget
EZ089372.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   **||*||||||||||||=|||||* targets:66   AGCCACUCAAUUCCCUCUAAUCCC   89 Target Full Sequence	2.5	TSA: Zea mays contig25018, mRNA sequence	NA	coding protein	psRNATarget
NM_001320255.1	ncRNA:24   AGGGGGAGUUAAGGGAGGUUAGGA   1   |*=|=||*||||||||=||||||| targets:1314   UGUCUCUAAAUUCCCUUCAAUCCU   1337 Target Full Sequence	2.5	Zea mays hypothetical protein (LOC100276558), transcript variant 1, mRNA	NA	coding protein	psRNATarget